RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TPT1P8Q9HAU6 139 aa4.02□□□□□ -1.77
NUP54-206ENST00000508465 SLC52A3Q9NQ40 469 aa4.02□□□□□ -1.77
NUP54-206ENST00000508465 CTPS2Q9NRF8 586 aa4.02□□□□□ -1.77
NUP54-206ENST00000508465 ACER3Q9NUN7 267 aa4.02□□□□□ -1.77
NUP54-206ENST00000508465 KLHL28Q9NXS3 571 aa4.02□□□□□ -1.77
NUP54-206ENST00000508465 SLC25A37Q9NYZ2 338 aa4.02□□□□□ -1.77
NUP54-206ENST00000508465 KCNN3Q9UGI6 736 aa4.02□□□□□ -1.77
NUP54-206ENST00000508465 HEATR5AQ86XA9 2040 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 A0A096LPI6 279 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 TMED7-TICAM2A0A0A6YYA0 188 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 A0A0G2JND7 137 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 A0A1W2PPL8 197 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 AGAP5A6NIR3 686 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 A6NNC1 897 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 H3BUI4 141 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 SLC16A6O15403 523 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 FRS3O43559 492 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 KIAA0513O60268 411 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 EDF1O60869 148 aaKnown RBP4.01□□□□□ -1.77
NUP54-206ENST00000508465 AK1P00568 194 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 BCHEP06276 602 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 VIMP08670 466 aaKnown RBP4.01□□□□□ -1.77
NUP54-206ENST00000508465 ZCCHC18P0CG32 403 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 IL7RP16871 459 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 ZNF17P17021 662 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 PGCP20142 388 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 CAPN3P20807 821 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 EDNRAP25101 427 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 SLC7A1P30825 629 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 UGT2B10P36537 528 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 EIF1P41567 113 aaKnown RBP4.01□□□□□ -1.77
NUP54-206ENST00000508465 ACAA2P42765 397 aaKnown RBP4.01□□□□□ -1.77
NUP54-206ENST00000508465 CTBP2P56545 445 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 OR2B6P58173 313 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 DSTNP60981 165 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 STX1BP61266 288 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 HPCAP84074 193 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 BNIP2Q12982 314 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 CBFBQ13951 182 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 FGFBP1Q14512 234 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 RGNQ15493 299 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 FBXL19-AS1Q494R0 122 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 PDSS1Q5T2R2 415 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 AP1ARQ63HQ0 302 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 OR2A2Q6IF42 318 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 PGBD2Q6P3X8 592 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 DLEU7Q6UYE1 221 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 DEF8Q6ZN54 512 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 LRRC74BQ6ZQY2 392 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 COLCA1Q6ZS62 124 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 C18orf65Q6ZTR6 163 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 PLEKHM3Q6ZWE6 761 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 CDC20BQ86Y33 519 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 ANKRD13BQ86YJ7 626 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 P3H2Q8IVL5 708 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 TUSC5Q8IXB3 177 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 CADM2Q8N3J6 435 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 METTL25Q8N6Q8 603 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 OR52P1PQ8NH57 321 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 NFKBIDQ8NI38 313 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 ZNF563Q8TA94 476 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 FAM222BQ8WU58 562 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 ABHD3Q8WU67 409 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 C14orf79Q96F83 325 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 LRRC46Q96FV0 321 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 TMEM19Q96HH6 336 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 ARL5BQ96KC2 179 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 KLHL15Q96M94 604 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 ZFP3Q96NJ6 502 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 SLC39A3Q9BRY0 314 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 POLDIP3Q9BY77 421 aaKnown RBP4.01□□□□□ -1.77
NUP54-206ENST00000508465 FAM234AQ9H0X4 552 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 PIGMQ9H3S5 423 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 IKZF5Q9H5V7 419 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 ZMAT3Q9HA38 289 aaKnown RBP4.01□□□□□ -1.77
NUP54-206ENST00000508465 TIGARQ9NQ88 270 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 PLSCR4Q9NRQ2 329 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 SERINC1Q9NRX5 453 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 RASSF1Q9NS23 344 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 FGFR1OP2Q9NVK5 253 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 VAPAQ9P0L0 249 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 C6orf203Q9P0P8 240 aaPredicted RBP4.01□□□□□ -1.77
NUP54-206ENST00000508465 MCTS1Q9ULC4 181 aaKnown RBP4.01□□□□□ -1.77
NUP54-206ENST00000508465 LIPT1Q9Y234 373 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 TMED7Q9Y3B3 224 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 ZNF175Q9Y473 711 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 SPG11Q96JI7 2443 aa4.01□□□□□ -1.77
NUP54-206ENST00000508465 VPS13CQ709C8 3753 aa4□□□□□ -1.77
NUP54-206ENST00000508465 UQCRHLA0A096LP55 91 aa4□□□□□ -1.77
NUP54-206ENST00000508465 A0A0G2JPF8 293 aa4□□□□□ -1.77
NUP54-206ENST00000508465 LOC100653049A0A140TA62 436 aa4□□□□□ -1.77
NUP54-206ENST00000508465 A0A1W2PPR1 153 aa4□□□□□ -1.77
NUP54-206ENST00000508465 TMEM72A0PK05 275 aa4□□□□□ -1.77
NUP54-206ENST00000508465 CFAP73A6NFT4 308 aa4□□□□□ -1.77
NUP54-206ENST00000508465 HNRNPCL2B2RXH8 293 aa4□□□□□ -1.77
NUP54-206ENST00000508465 ZNF814B7Z6K7 855 aa4□□□□□ -1.77
NUP54-206ENST00000508465 HNRNPCL3B7ZW38 293 aa4□□□□□ -1.77
NUP54-206ENST00000508465 C5orf58C9J3I9 102 aa4□□□□□ -1.77
NUP54-206ENST00000508465 C16orf97H3BN30 126 aa4□□□□□ -1.77
NUP54-206ENST00000508465 M0R3H8 397 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms