RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZNF440Q8IYI8 595 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 MS4A15Q8N5U1 240 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 HLA-CQ95604 372 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 ADAD1Q96M93 576 aaKnown RBP13.14□□□□□ -0.31
DDX41-208ENST00000507955 AMELYQ99218 206 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 NKX3-1Q99801 234 aaPredicted RBP13.14□□□□□ -0.31
DDX41-208ENST00000507955 TRAF4Q9BUZ4 470 aaPredicted RBP13.14□□□□□ -0.31
DDX41-208ENST00000507955 EVA1AQ9H8M9 152 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 ZFP64Q9NPA5 681 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 ANKRD10Q9NXR5 420 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 A0A1B0GX78 115 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 TSPAN2O60636 221 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 RAD1O60671 282 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 AKR7A3O95154 331 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 CXCL3P19876 107 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 IL11P20809 199 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 SDHAP31040 664 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 TALDO1P37837 337 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 CREB3L2Q70SY1 520 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 SPEM1Q8N4L4 309 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 OR11H4Q8NGC9 324 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 PIGKQ92643 395 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 ATOH1Q92858 354 aaPredicted RBP13.13□□□□□ -0.31
DDX41-208ENST00000507955 SCMH1Q96GD3 660 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 SLC41A2Q96JW4 573 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 ULBP3Q9BZM4 244 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 SLC19A3Q9BZV2 496 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 SLC7A5P2Q9GIP4 190 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 ADAM19Q9H013 955 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 PRDM6Q9NQX0 595 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 TAS2R5Q9NYW4 299 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 K7ESF4 209 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 TSC22D2O75157 780 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 CENPAP49450 140 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 DGCR2P98153 550 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 C19orf57Q0VDD7 668 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 MRPL28Q13084 256 aaKnown RBP13.13□□□□□ -0.31
DDX41-208ENST00000507955 ETFDHQ16134 617 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 ZSWIM7Q19AV6 140 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 LIPNQ5VXI9 398 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 BICRALQ6AI39 1079 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 RPL22L1Q6P5R6 122 aaKnown RBP13.13□□□□□ -0.31
DDX41-208ENST00000507955 SYS1Q8N2H4 156 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 EXD3Q8N9H8 876 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 OR1N1Q8NGS0 311 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 OR6N2Q8NGY6 317 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 OR10AC1Q8NH08 325 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 YIPF5Q969M3 257 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 PHF21AQ96BD5 680 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 KCTD12Q96CX2 325 aaKnown RBP13.13□□□□□ -0.31
DDX41-208ENST00000507955 COPS7AQ9UBW8 275 aa13.13□□□□□ -0.31
DDX41-208ENST00000507955 MRM2Q9UI43 246 aaKnown RBP13.13□□□□□ -0.31
DDX41-208ENST00000507955 C7orf66A4D0T2 115 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 FLRT2O43155 660 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 PTHLHP12272 177 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 SRMP19623 302 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 OR3A3P47888 321 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 GUSBP11Q6P575 273 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 SLC35D2Q76EJ3 337 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 COX15Q7KZN9 410 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 TPRA1Q86W33 373 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 SLITRK4Q8IW52 837 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 DNAAF1Q8NEP3 725 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 OR51A4Q8NGJ6 313 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 OR2I1PQ8NGU4 316 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 OR8K3Q8NH51 312 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 STT3BQ8TCJ2 826 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 THEM6Q8WUY1 208 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 DNASE2BQ8WZ79 361 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 DAZLQ92904 295 aaKnown RBP13.12□□□□□ -0.31
DDX41-208ENST00000507955 GPX7Q96SL4 187 aaPredicted RBP13.12□□□□□ -0.31
DDX41-208ENST00000507955 LAT2Q9GZY6 243 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 AKIRIN1Q9H9L7 192 aaPredicted RBP13.12□□□□□ -0.31
DDX41-208ENST00000507955 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
DDX41-208ENST00000507955 IKZF2Q9UKS7 526 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 SHISA8B8ZZ34 492 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 CXCL12P48061 93 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 CCR6P51684 374 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 FBXW4P57775 412 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 HSD17B12Q53GQ0 312 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 SIAH3Q8IW03 269 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 LGALS14Q8TCE9 139 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 PPP1R14AQ96A00 147 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 CHRNA10Q9GZZ6 450 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 MED28Q9H204 178 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 FRRS1LQ9P0K9 344 aa13.12□□□□□ -0.31
DDX41-208ENST00000507955 HIST1H2ABP04908 130 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 UCHL1P09936 223 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 ANKRD34CP0C6C1 535 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 DHPSP49366 369 aaPredicted RBP13.11□□□□□ -0.31
DDX41-208ENST00000507955 TRAM1Q15629 374 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 ZNF684Q5T5D7 378 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 HIST3H2AQ7L7L0 130 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 SLC29A4Q7RTT9 530 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 ZNF671Q8TAW3 534 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 HIST1H2ACQ93077 130 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 MVB12AQ96EY5 273 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 HYLS1Q96M11 299 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 OR6C1Q96RD1 312 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms