RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 AP3B1O00203 1094 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 GOSR2O14653 212 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 PSTPIP1O43586 416 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 IGHV3-43DP0DP04 118 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 RPS2P15880 293 aaKnown RBP2.22□□□□□ -2.05
LSM6-205ENST00000507449 TCN1P20061 433 aaPredicted RBP2.22□□□□□ -2.05
LSM6-205ENST00000507449 GPR6P46095 362 aaPredicted RBP2.22□□□□□ -2.05
LSM6-205ENST00000507449 SUCLG1P53597 346 aaKnown RBP2.22□□□□□ -2.05
LSM6-205ENST00000507449 KCNJ2P63252 427 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 MPPED2Q15777 294 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 SGCAQ16586 387 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 GUCA2BQ16661 112 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 RSPO1Q2MKA7 263 aaPredicted RBP2.22□□□□□ -2.05
LSM6-205ENST00000507449 ZNF658BQ4V348 819 aaPredicted RBP2.22□□□□□ -2.05
LSM6-205ENST00000507449 LRRC10Q5BKY1 277 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 VAX1Q5SQQ9 334 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 FRMPD2BQ6IN97 320 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 RNASEKQ6P5S7 137 aaKnown RBP2.22□□□□□ -2.05
LSM6-205ENST00000507449 CNIH2Q6PI25 160 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 LRRC74BQ6ZQY2 392 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 NIPA1Q7RTP0 329 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 TAS2R42Q7RTR8 314 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 LHFPL3Q86UP9 236 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 RNF175Q8N4F7 328 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 MS4A15Q8N5U1 240 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 Q8N9W7 124 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 KCNG3Q8TAE7 436 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 SLC22A8Q8TCC7 542 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 SLC2A14Q8TDB8 520 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 BLOC1S5Q8TDH9 187 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 FAM104AQ969W3 186 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 ZNF414Q96IQ9 312 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 TPD52L3Q96J77 140 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 IFT74Q96LB3 600 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 HSFY1Q96LI6 401 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 RARRES2Q99969 163 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 DNTTIP1Q9H147 329 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 NEUROG2Q9H2A3 272 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 GLRX2Q9NS18 164 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 SLC25A37Q9NYZ2 338 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 IKZF2Q9UKS7 526 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 A0A1B0GVI7 797 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 GOLGA8OA6NCC3 632 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 CCDC182A6NF36 153 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 TRIM49D1C9J1S8 452 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 GOLGA8NF8WBI6 632 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 SLC31A2O15432 143 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 IGLV2-23P01705 113 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 PCCAP05165 728 aaPredicted RBP2.21□□□□□ -2.06
LSM6-205ENST00000507449 SERPIND1P05546 499 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 GKN3PP0CG01 181 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 CCNCP24863 283 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 HSD17B2P37059 387 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 SSR1P43307 286 aaKnown RBP2.21□□□□□ -2.06
LSM6-205ENST00000507449 TFPI2P48307 235 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 SUB1P53999 127 aaKnown RBP eCLIP2.21□□□□□ -2.06
LSM6-205ENST00000507449 PRMT2P55345 433 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 GPX6P59796 221 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 CYB5R2Q6BCY4 276 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 TMEM107Q6UX40 140 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 ZNF429Q86V71 674 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 ARIH2OSQ8N7S6 290 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 OR10G9Q8NGN4 311 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 RAB3IL1Q8TBN0 382 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 SRSF12Q8WXF0 261 aaKnown RBP2.21□□□□□ -2.06
LSM6-205ENST00000507449 SGK3Q96BR1 496 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 MED8Q96G25 268 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 ZNF285Q96NJ3 590 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 SH3GL1Q99961 368 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 GPR61Q9BZJ8 451 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 CLMPQ9H6B4 373 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 CWH43Q9H720 699 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 TM9SF3Q9HD45 589 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 SLCO1B3Q9NPD5 702 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 DMAP1Q9NPF5 467 aaPredicted RBP2.21□□□□□ -2.06
LSM6-205ENST00000507449 EXD2Q9NVH0 621 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 NMRK1Q9NWW6 199 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 STARD10Q9Y365 291 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 MSH6P52701 1360 aa2.21□□□□□ -2.06
LSM6-205ENST00000507449 CDC42BPBQ9Y5S2 1711 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 TRBV6-6A0A0A6YYG2 114 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 FAM47DPA6NHR8 397 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 PEX7O00628 323 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 MGRN1O60291 552 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 TSPAN13O95857 204 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 C2P06681 752 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 CSF3P09919 207 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 MCF2P10911 925 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 FOLR1P15328 257 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 SLC2A5P22732 501 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 GDI1P31150 447 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 RORAP35398 523 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 RFX3P48380 749 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 CCR6P51684 374 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 NCBP2P52298 156 aaKnown RBP eCLIP2.2□□□□□ -2.06
LSM6-205ENST00000507449 ATP5IP56385 69 aaPredicted RBP2.2□□□□□ -2.06
LSM6-205ENST00000507449 BEX3Q00994 111 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 MECOMQ03112 1051 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 ZNF92Q03936 586 aa2.2□□□□□ -2.06
LSM6-205ENST00000507449 AQP6Q13520 282 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms