RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 APEHP13798 732 aaKnown RBP11.34□□□□□ -0.59
TCOF1-210ENST00000506767 ZNF23P17027 643 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 DAPP51397 102 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 DAP3P51398 398 aaKnown RBP11.34□□□□□ -0.59
TCOF1-210ENST00000506767 RPL27P61353 136 aaKnown RBP11.34□□□□□ -0.59
TCOF1-210ENST00000506767 MELKQ14680 651 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 RPL13AP3Q6NVV1 102 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 KLHL17Q6TDP4 642 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 DPY19L2P2Q6ZN68 376 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 IGFN1Q86VF2 1251 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 ZDHHC13Q8IUH4 622 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 C20orf196Q8IYI0 205 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 PQLC1Q8N2U9 271 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 POMGNT2Q8NAT1 580 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 ZNF519Q8TB69 540 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 FANK1Q8TC84 345 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 RNASE6Q93091 150 aaKnown RBP11.34□□□□□ -0.59
TCOF1-210ENST00000506767 SLC25A44Q96H78 314 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-210ENST00000506767 PSMG3-AS1Q96PY0 264 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 TSPAN32Q96QS1 320 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 KATNB1Q9BVA0 655 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 RBM24Q9BX46 236 aaKnown RBP11.34□□□□□ -0.59
TCOF1-210ENST00000506767 MRPL13Q9BYD1 178 aaKnown RBP11.34□□□□□ -0.59
TCOF1-210ENST00000506767 SLCO5A1Q9H2Y9 848 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 EGLN3Q9H6Z9 239 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 GALNT8Q9NY28 637 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 IL20RAQ9UHF4 553 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 ZNF346Q9UL40 294 aaKnown RBP11.34□□□□□ -0.59
TCOF1-210ENST00000506767 OAZ3Q9UMX2 235 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 CDH10Q9Y6N8 788 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 FREM1Q5H8C1 2179 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 ZNF726A6NNF4 738 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 CENPBD1B2RD01 187 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 RPL36A-HNRNPH2H7BZ11 118 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 ARPC3O15145 178 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 SLC43A1O75387 559 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 UPK3AO75631 287 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 TXNDC12O95881 172 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 IGHV3-9P01782 118 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 PGA4P0DJD7 388 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 PGA3P0DJD8 388 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 ACADSP16219 412 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 COX5AP20674 150 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 RPL4P36578 427 aaKnown RBP11.33□□□□□ -0.6
TCOF1-210ENST00000506767 CD79BP40259 229 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 ERVK-25P63136 954 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 RUNX1T1Q06455 604 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 LGALS3BPQ08380 585 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 FAM27E3Q08E93 113 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 CAMK2DQ13557 499 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 P2RY6Q15077 328 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 HIST3H3Q16695 136 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 PHYHD1Q5SRE7 291 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 STAC2Q6ZMT1 411 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 ZNF771Q7L3S4 317 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-210ENST00000506767 LINGO2Q7L985 606 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 ACBD4Q8NC06 268 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 OR8D4Q8NGM9 314 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 DNAJC9Q8WXX5 260 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 TMEM54Q969K7 222 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 SAMD8Q96LT4 415 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 POLDIP3Q9BY77 421 aaKnown RBP11.33□□□□□ -0.6
TCOF1-210ENST00000506767 PLA2G12AQ9BZM1 189 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 NDEL1Q9GZM8 345 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 NPDC1Q9NQX5 325 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-210ENST00000506767 ADAM18Q9Y3Q7 739 aa11.33□□□□□ -0.6
TCOF1-210ENST00000506767 C19orf84I3L1E1 186 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 BHLHE40O14503 412 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 IMPA2O14732 288 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 TRMUO75648 421 aaKnown RBP11.32□□□□□ -0.6
TCOF1-210ENST00000506767 IGFBP1P08833 259 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-210ENST00000506767 OSMP13725 252 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 IGFBP2P18065 325 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 PSMB1P20618 241 aaKnown RBP11.32□□□□□ -0.6
TCOF1-210ENST00000506767 IGHV1-2P23083 117 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 GRNP28799 593 aaKnown RBP11.32□□□□□ -0.6
TCOF1-210ENST00000506767 SDHAP31040 664 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 SLC6A6P31641 620 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 ACVR1BP36896 505 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 FOXG1P55316 489 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-210ENST00000506767 PPP2R2BQ00005 443 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 FAPQ12884 760 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 SFRP5Q5T4F7 317 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 FAM205BPQ63HN1 556 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 KDM4DQ6B0I6 523 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 HIST2H2BCQ6DN03 193 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 GPR139Q6DWJ6 353 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 HDDC2Q7Z4H3 204 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 UBE2J2Q8N2K1 259 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 PARP8Q8N3A8 854 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 ARIH2OSQ8N7S6 290 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 ATG16L2Q8NAA4 619 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 ICA1LQ8NDH6 482 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 HDAC2Q92769 488 aaKnown RBP11.32□□□□□ -0.6
TCOF1-210ENST00000506767 ZNF566Q969W8 418 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 LRRC46Q96FV0 321 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 BOD1Q96IK1 185 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 Q96M85 177 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
TCOF1-210ENST00000506767 OSBPL10Q9BXB5 764 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms