RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 BGLAPP02818 100 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 CSF3P09919 207 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 IGKV1-13P0DP09 117 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 NCK1P16333 377 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 VHLP40337 213 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 MAGEA8P43361 318 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 UBE2HP62256 183 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 IRX3P78415 501 aaPredicted RBP1.62□□□□□ -2.15
GYPB-207ENST00000506679 HMGCS1Q01581 520 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 FGL1Q08830 312 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 SCRN3Q0VDG4 424 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 SMARCB1Q12824 385 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 SLAQ13239 276 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 GPM6BQ13491 265 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 ZNF77Q15935 545 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 COA6Q5JTJ3 125 aaKnown RBP1.62□□□□□ -2.15
GYPB-207ENST00000506679 FAM71E1Q6IPT2 247 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 H2AFVQ71UI9 128 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 UTS2BQ765I0 119 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 ZNF695Q8IW36 515 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 CYB561D1Q8N8Q1 229 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 C15orf56Q8N910 161 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 FAM110BQ8TC76 370 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 SLC22A8Q8TCC7 542 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 ZFP90Q8TF47 636 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 EXOSC8Q96B26 276 aaKnown RBP1.62□□□□□ -2.15
GYPB-207ENST00000506679 ZNF641Q96N77 438 aaPredicted RBP1.62□□□□□ -2.15
GYPB-207ENST00000506679 WFIKKN1Q96NZ8 548 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 PSKH2Q96QS6 385 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 COPS8Q99627 209 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 RIOK1Q9BRS2 568 aaKnown RBP1.62□□□□□ -2.15
GYPB-207ENST00000506679 GORASP2Q9H8Y8 452 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 EXD2Q9NVH0 621 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 OPN4Q9UHM6 478 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 PACSIN2Q9UNF0 486 aaPredicted RBP1.62□□□□□ -2.15
GYPB-207ENST00000506679 KIF26AQ9ULI4 1882 aaPredicted RBP1.62□□□□□ -2.15
GYPB-207ENST00000506679 CDHR2Q9BYE9 1310 aa1.62□□□□□ -2.15
GYPB-207ENST00000506679 C15orf38-AP3S2A0A0A6YYH1 394 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 A0A1B0GVI7 797 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 A0A1W2PPV9 198 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 H0YCG3 227 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 H3BNH8 94 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 CPLX1O14810 134 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 SPAG7O75391 227 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 OR7A10O76100 309 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 TLX1NBP0CAT3 122 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 TCN1P20061 433 aaPredicted RBP1.61□□□□□ -2.15
GYPB-207ENST00000506679 GLRA2P23416 452 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 CD1CP29017 333 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 GPR6P46095 362 aaPredicted RBP1.61□□□□□ -2.15
GYPB-207ENST00000506679 SUB1P53999 127 aaKnown RBP eCLIP1.61□□□□□ -2.15
GYPB-207ENST00000506679 TTLL9Q3SXZ7 439 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 KCTD21Q4G0X4 260 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 GALNT17Q6IS24 598 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 TRIM40Q6P9F5 258 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 SLC25A48Q6ZT89 311 aaKnown RBP1.61□□□□□ -2.15
GYPB-207ENST00000506679 STPG2Q8N412 459 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 ARL6IP6Q8N6S5 226 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 FAM86B1Q8N7N1 296 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 ZNF557Q8N988 423 aaPredicted RBP1.61□□□□□ -2.15
GYPB-207ENST00000506679 CCDC54Q8NEL0 328 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.61□□□□□ -2.15
GYPB-207ENST00000506679 DNAJC19Q96DA6 116 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 TRIM44Q96DX7 344 aaPredicted RBP1.61□□□□□ -2.15
GYPB-207ENST00000506679 RPRD1AQ96P16 312 aaPredicted RBP1.61□□□□□ -2.15
GYPB-207ENST00000506679 MS4A4EQ96PG1 132 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 TRIM62Q9BVG3 475 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 LINC00597Q9H2U6 94 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 ANKRD19PQ9H560 264 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 RPP21Q9H633 154 aaKnown RBP1.61□□□□□ -2.15
GYPB-207ENST00000506679 NMRAL1Q9HBL8 299 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 MRPL47Q9HD33 250 aaKnown RBP1.61□□□□□ -2.15
GYPB-207ENST00000506679 SLC40A1Q9NP59 571 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 SLCO1B3Q9NPD5 702 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 ADAP2Q9NPF8 381 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 POLE4Q9NR33 117 aa1.61□□□□□ -2.15
GYPB-207ENST00000506679 ZNF282Q9UDV7 671 aaPredicted RBP1.61□□□□□ -2.15
GYPB-207ENST00000506679 CEMIPQ8WUJ3 1361 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 IGHV3-66A0A0C4DH42 116 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 CLRN2A0PK11 232 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 PRSS37A4D1T9 235 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 ZNF726A6NNF4 738 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 H0YHG0 523 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 XKRYO14609 159 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 TIMM8AO60220 97 aaPredicted RBP1.6□□□□□ -2.15
GYPB-207ENST00000506679 TOM1O60784 492 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 C1orf105O95561 183 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 CNR1P21554 472 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 GYG1P46976 350 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 IFNAR2P48551 515 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 UBE2AP49459 152 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 NCBP2P52298 156 aaKnown RBP eCLIP1.6□□□□□ -2.15
GYPB-207ENST00000506679 OGDHQ02218 1023 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 IL24Q13007 206 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 AQP6Q13520 282 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 UBE2SQ16763 222 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 LINC00483Q53H64 154 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 C5orf47Q569G3 176 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 Q5W150 140 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 DUX4L9Q6RFH8 374 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms