RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CRYAAP02489 173 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 VIMP08670 466 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 ASAH2BP0C7U1 165 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 ADORA3P0DMS8 318 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 CALCRP30988 508 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 IL1RL1Q01638 556 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 SF3A3Q12874 501 aaKnown RBP eCLIP7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 CAMK2DQ13557 499 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 MMEL1Q495T6 779 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 TTC33Q6PID6 262 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 SLC46A3Q7Z3Q1 461 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 CARM1Q86X55 608 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 CCDC36Q8IYA8 594 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 C10orf53Q8N6V4 93 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 MAPK1IP1LQ8NDC0 245 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 SLC26A7Q8TE54 656 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF75AQ96N20 296 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 POLR2J2Q9GZM3 115 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 POLR2J3Q9H1A7 115 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 MED4Q9NPJ6 270 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 MEPEQ9NQ76 525 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 CA10Q9NS85 328 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 B3GNT2Q9NY97 397 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 TAS2R5Q9NYW4 299 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF224Q9NZL3 707 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF229Q9UJW7 825 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 BAG5Q9UL15 447 aa7.88□□□□□ -1.15
PDLIM5-209ENST00000506632 IGHV4-30-2A0A087WSY4 118 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 IGHV2OR16-5A0A0B4J2B6 119 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 INAFM1C9JVW0 142 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 SEC14L2O76054 403 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 OR5F1O95221 314 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 CH25HO95992 272 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 CELA3BP08861 270 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 IFNGR1P15260 489 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 TNFRSF1BP20333 461 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 KDELR2P33947 212 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 ARR3P36575 388 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 MDH1P40925 334 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 EFNA4P52798 201 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 NUDT6P53370 316 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 DSCR9P59020 149 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 HGFACQ04756 655 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 CHRNB3Q05901 458 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 RAB35Q15286 201 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 EFNB3Q15768 340 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 ADIPOQQ15848 244 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 CARD17Q5XLA6 110 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 SLC35D2Q76EJ3 337 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 MDP1Q86V88 176 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 LRRC17Q8N6Y2 441 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 PCYOX1LQ8NBM8 494 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 NUP37Q8NFH4 326 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 OR4F15Q8NGB8 312 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 OR6X1Q8NH79 312 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 RP9Q8TA86 221 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 HTRA1Q92743 480 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 PROX1Q92786 737 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 TMEM54Q969K7 222 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 KCNS3Q9BQ31 491 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF442Q9H7R0 627 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 NOX3Q9HBY0 568 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 B3GAT2Q9NPZ5 323 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 NANSQ9NR45 359 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 GID8Q9NWU2 228 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 ARMCX1Q9P291 453 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 SH3GLB1Q9Y371 365 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 PMF1-BGLAPU3KQ54 211 aa7.87□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF726A6NNF4 738 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 B9A039 149 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 C11orf98E9PRG8 122 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 KPNA4O00629 521 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 IFNA14P01570 189 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 HLA-HP01893 362 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 MT-ND1P03886 318 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 TSPAN19P0C672 248 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 THRBP10828 461 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 BMP4P12644 408 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 B4GALT1P15291 398 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF14P17017 642 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 AHCYP23526 432 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 SERPINF1P36955 418 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 RBM34P42696 430 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 CSNK1A1P48729 337 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 IDH3GP51553 393 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 UGT2B15P54855 530 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 BIDP55957 195 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 CYBRD1Q53TN4 286 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 HSP90B2PQ58FF3 399 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 C8orf82Q6P1X6 216 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 LRFN4Q6PJG9 635 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 CLEC2AQ6UVW9 174 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF813Q6ZN06 617 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 DEF8Q6ZN54 512 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 NKAIN4Q8IVV8 208 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 SLC15A3Q8IY34 581 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 MICU2Q8IYU8 434 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 ZNF525Q8N782 197 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 POU5F2Q8N7G0 328 aa7.86□□□□□ -1.15
PDLIM5-209ENST00000506632 OR2T12Q8NG77 320 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms