RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 GPR137CQ8N3F9 429 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 PAQR4Q8N4S7 273 aaPredicted RBP5.02□□□□□ -1.61
GYPB-205ENST00000505583 MRPL24Q96A35 216 aaKnown RBP5.02□□□□□ -1.61
GYPB-205ENST00000505583 ANKRD27Q96NW4 1050 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 MOGAT1Q96PD6 335 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 TSPAN32Q96QS1 320 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 OR52B2Q96RD2 323 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 PAIP1Q9H074 479 aaKnown RBP5.02□□□□□ -1.61
GYPB-205ENST00000505583 RASSF4Q9H2L5 321 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 BCL2L10Q9HD36 194 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 SSU72Q9NP77 194 aaKnown RBP5.02□□□□□ -1.61
GYPB-205ENST00000505583 HIF1ANQ9NWT6 349 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 MED29Q9NX70 200 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 SLC25A37Q9NYZ2 338 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 TREM2Q9NZC2 230 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 SLAMF8Q9P0V8 285 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 KLHL14Q9P2G3 628 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 REV1Q9UBZ9 1251 aa5.02□□□□□ -1.61
GYPB-205ENST00000505583 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.02□□□□□ -1.61
GYPB-205ENST00000505583 V9GYY5 206 aaPredicted RBP5.02□□□□□ -1.61
GYPB-205ENST00000505583 A0A087WUJ7 227 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 LOC102725191A0A1B0GVB3 256 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 B4DSR2 109 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 M0R233 179 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 AIM2O14862 343 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 TM9SF1O15321 606 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 HDAC3O15379 428 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 RGS16O15492 202 aaPredicted RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 SYNGR3O43761 229 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 SNNO75324 88 aaPredicted RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 SLC22A3O75751 556 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 CLPTM1O96005 669 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 BGLAPP02818 100 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 IL6P05231 212 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 MSMBP08118 114 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 ZCCHC18P0CG32 403 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 GAAP10253 952 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 KITP10721 976 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 CD79AP11912 226 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 CCL2P13500 99 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 PAX7P23759 505 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 GLRXP35754 106 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 RBMXP38159 391 aaKnown RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 MAGEB1P43366 347 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 GIPRP48546 466 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 PTDSS1P48651 473 aaKnown RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 ERVS71-1P61550 626 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 LMO4P61968 165 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 POU3F1Q03052 451 aaPredicted RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 CAMK2DQ13557 499 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 C1DQ13901 141 aaKnown RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 RAB39AQ14964 217 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 RGNQ15493 299 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 GSG1Q2KHT4 349 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 ALKBH6Q3KRA9 238 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 PDCD4Q53EL6 469 aaKnown RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 ALG10BQ5I7T1 473 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 C6orf10Q5SRN2 563 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 FAM69AQ5T7M9 428 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 NXNQ6DKJ4 435 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 TREML4Q6UXN2 200 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 ZNF813Q6ZN06 617 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 H1FNTQ75WM6 255 aaPredicted RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 ZNF627Q7L945 461 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 REC114Q7Z4M0 266 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 SKA3Q8IX90 412 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 MREGQ8N565 214 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 LSMEM1Q8N8F7 131 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 ANKRD42Q8N9B4 389 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 GLB1L3Q8NCI6 653 aaPredicted RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 PIK3C3Q8NEB9 887 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 GTF3AQ92664 365 aaKnown RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 GTF2H4Q92759 462 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 TMEM186Q96B77 213 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 SLC41A3Q96GZ6 507 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 MAELQ96JY0 434 aaKnown RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 LRRC37BQ96QE4 947 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 ZBTB18Q99592 522 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 PAIP2Q9BPZ3 127 aaKnown RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 CENPHQ9H3R5 247 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 IKZF5Q9H5V7 419 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 KCNK9Q9NPC2 374 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 A4GALTQ9NPC4 353 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 SDR39U1Q9NRG7 319 aaPredicted RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 ZNF275Q9NSD4 429 aaPredicted RBP5.01□□□□□ -1.61
GYPB-205ENST00000505583 CALML5Q9NZT1 146 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 USP22Q9UPT9 525 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 CMAHPQ9Y471 501 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 SPEF1Q9Y4P9 236 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 PCDHB14Q9Y5E9 798 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 CACNG2Q9Y698 323 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 ARHGAP32A7KAX9 2087 aa5.01□□□□□ -1.61
GYPB-205ENST00000505583 TRAV36DV7A0A075B6V5 113 aa5□□□□□ -1.61
GYPB-205ENST00000505583 LOC105371242A0A075B767 164 aa5□□□□□ -1.61
GYPB-205ENST00000505583 VSTM5A8MXK1 200 aa5□□□□□ -1.61
GYPB-205ENST00000505583 CLIC1O00299 241 aa5□□□□□ -1.61
GYPB-205ENST00000505583 PPIHO43447 177 aaKnown RBP5□□□□□ -1.61
GYPB-205ENST00000505583 SPRY1O43609 319 aaPredicted RBP5□□□□□ -1.61
GYPB-205ENST00000505583 CDC14BO60729 498 aa5□□□□□ -1.61
GYPB-205ENST00000505583 SERPINI2O75830 405 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms