RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PATE4P0C8F1 98 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 NQO1P15559 274 aaKnown RBP11.35□□□□□ -0.59
DDX41-204ENST00000504807 PCGF2P35227 344 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 SERPINF1P36955 418 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 LSM11P83369 360 aaKnown RBP eCLIP11.35□□□□□ -0.59
DDX41-204ENST00000504807 NPRL3Q12980 569 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 ZNF74Q16587 644 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 CYP51A1Q16850 503 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 NANOGP8Q6NSW7 305 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 HDXQ7Z353 690 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 SLC46A3Q7Z3Q1 461 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 CALHM3Q86XJ0 350 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 UEVLDQ8IX04 471 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 CDK20Q8IZL9 346 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 GPR137CQ8N3F9 429 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.35□□□□□ -0.59
DDX41-204ENST00000504807 ADAMTS16Q8TE57 1224 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 C1orf159Q96HA4 380 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 ZNF607Q96SK3 696 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 ZNF426Q9BUY5 554 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 PLK3Q9H4B4 646 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 VIPAS39Q9H9C1 493 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 NANOGQ9H9S0 305 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 TMEM27Q9HBJ8 222 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 MEPEQ9NQ76 525 aaPredicted RBP11.35□□□□□ -0.59
DDX41-204ENST00000504807 MRPL39Q9NYK5 338 aaKnown RBP11.35□□□□□ -0.59
DDX41-204ENST00000504807 SLC7A7Q9UM01 511 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 CORO2BQ9UQ03 480 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 OR6C65A6NJZ3 312 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 ANGPT2O15123 496 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 CHP2O43745 196 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 CRYAAP02489 173 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 IFNGR1P15260 489 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 B4GALT1P15291 398 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 ZNF14P17017 642 aaPredicted RBP11.34□□□□□ -0.59
DDX41-204ENST00000504807 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
DDX41-204ENST00000504807 NCALDP61601 193 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 VLDLRP98155 873 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 PIGFQ07326 219 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 PUDPQ08623 228 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 RBBP4Q09028 425 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 PMS2P3Q13401 168 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 MELKQ14680 651 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 MFSD13AQ14CX5 517 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 EFNB3Q15768 340 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 C3orf36Q3SXR2 165 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 ZNF613Q6PF04 617 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 C5orf46Q6UWT4 87 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 ZNF627Q7L945 461 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 RANBP3LQ86VV4 465 aaPredicted RBP11.34□□□□□ -0.59
DDX41-204ENST00000504807 ZNF584Q8IVC4 421 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 SVOPLQ8N434 492 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 FAM169BQ8N8A8 192 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 SCAIQ8N9R8 606 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 PIK3C3Q8NEB9 887 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 ANKK1Q8NFD2 765 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 ZMYND19Q96E35 227 aaPredicted RBP11.34□□□□□ -0.59
DDX41-204ENST00000504807 FOXN4Q96NZ1 517 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 DOK1Q99704 481 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 HEATR1Q9H583 2144 aaKnown RBP11.34□□□□□ -0.59
DDX41-204ENST00000504807 RABEP2Q9H5N1 569 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 TRRAPQ9Y4A5 3859 aa11.34□□□□□ -0.59
DDX41-204ENST00000504807 LYNX1G3V0Z9 82 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 LMX1BO60663 402 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 FMO6PO60774 539 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 SERPINB7O75635 380 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 CH25HO95992 272 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 LYNX1P0DP58 116 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 SLC25A16P16260 332 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 FUT1P19526 365 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 AHCYP23526 432 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 IGFBP5P24593 272 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 IL2RGP31785 369 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 UGT2B15P54855 530 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 BIDP55957 195 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 DSCR9P59020 149 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 CHRNB3Q05901 458 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 VMACQ2NL98 169 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
DDX41-204ENST00000504807 C1QTNF12Q5T7M4 302 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 REP15Q6BDI9 236 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 KRT80Q6KB66 452 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 LRFN4Q6PJG9 635 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 LRP11Q86VZ4 500 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 NKAIN4Q8IVV8 208 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 C10orf53Q8N6V4 93 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 PFN4Q8NHR9 129 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 TMEM54Q969K7 222 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 ZNF317Q96PQ6 595 aaPredicted RBP11.33□□□□□ -0.6
DDX41-204ENST00000504807 VRK1Q99986 396 aaPredicted RBP11.33□□□□□ -0.6
DDX41-204ENST00000504807 ASPNQ9BXN1 380 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 PCDHAC1Q9H158 963 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 CHODLQ9H9P2 273 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 C20orf141Q9NUB4 165 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 FGFR1OP2Q9NVK5 253 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 MYEF2Q9P2K5 600 aaKnown RBP11.33□□□□□ -0.6
DDX41-204ENST00000504807 CORINQ9Y5Q5 1042 aa11.33□□□□□ -0.6
DDX41-204ENST00000504807 hCG_2039718K7EN88 272 aa11.32□□□□□ -0.6
DDX41-204ENST00000504807 ASAH2BP0C7U1 165 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms