RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CARD17Q5XLA6 110 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 ATG16L1Q676U5 607 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 LRRC74BQ6ZQY2 392 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 ZNF627Q7L945 461 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 ZNF572Q7Z3I7 529 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 SNX32Q86XE0 403 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 C20orf196Q8IYI0 205 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 ANKFN1Q8N957 763 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 MZB1Q8WU39 189 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 C11orf40Q8WZ69 217 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 NEURL3Q96EH8 262 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 GATA5Q9BWX5 397 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 RLIMQ9NVW2 624 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 ZNF224Q9NZL3 707 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 PSMC3IPQ9P2W1 217 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 HMGN4O00479 90 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 AIM2O14862 343 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 IGHMP01871 453 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 SERPINA5P05154 406 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 LCKP06239 509 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 G6PDP11413 515 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 NCF2P19878 526 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 DRD4P21917 467 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 ACAA2P42765 397 aaKnown RBP13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 AQP5P55064 265 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 RBBP4Q09028 425 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 SYT10Q6XYQ8 523 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 C10orf107Q8IVU9 208 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 PEX5LQ8IYB4 626 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 VPS37AQ8NEZ2 397 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 ZNF519Q8TB69 540 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 LRR1Q96L50 414 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 FOXB1Q99853 325 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 PTDSS2Q9BVG9 487 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 SEC14L4Q9UDX3 406 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 INSIG2Q9Y5U4 225 aa13.39□□□□□ -0.27
PDLIM7-210ENST00000503827 CDHR4A6H8M9 788 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 FAM181BA6NEQ2 426 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 TRAPPC2LH3BP13 241 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 TRIM13O60858 407 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 NGFP01138 241 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 CHRNGP07510 517 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 MAKP20794 623 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 CASQ1P31415 396 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 MAD2L1Q13257 205 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 FAM209AQ5JX71 171 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 ASPHD2Q6ICH7 369 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 ANKRD46Q86W74 232 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 RNF130Q86XS8 419 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 ZNF584Q8IVC4 421 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 CPEB3Q8NE35 698 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 OR8J2Q8NGG1 315 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 OR52E2Q8NGJ4 325 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 AGR3Q8TD06 166 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 C3orf30Q96M34 536 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 SLC35A5Q9BS91 424 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 RSPO3Q9BXY4 272 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 OR51B6Q9H340 312 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 CDH20Q9HBT6 801 aa13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 POLR3KQ9Y2Y1 108 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-210ENST00000503827 LOC102725191A0A1B0GVB3 256 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 PRSS51A0A1B0GVH4 220 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 CLPSL1A2RUU4 121 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 SLC22A31A6NKX4 558 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 M0R082 166 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 PIN1P1O15428 100 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 HOXA3O43365 443 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 OR2T1O43869 369 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 OR8G3PP0DMU2 310 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 CRHR1P34998 444 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 ANXA11P50995 505 aaKnown RBP13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 ZNF81P51508 661 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 TAF9Q16594 264 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 ANXA8L1Q5VT79 327 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 JAZF1Q86VZ6 243 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 UEVLDQ8IX04 471 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 PARP8Q8N3A8 854 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 SLC30A7Q8NEW0 376 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 ZNF417Q8TAU3 575 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 PNPT1Q8TCS8 783 aaKnown RBP13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 TUBGCP3Q96CW5 907 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 KTI12Q96EK9 354 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 ZNF587Q96SQ5 575 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 MECRQ9BV79 373 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 EMC6Q9BV81 110 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 ULBP2Q9BZM5 246 aa13.37□□□□□ -0.27
PDLIM7-210ENST00000503827 UBOX5O94941 541 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 NDUFA7O95182 113 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 PATE4P0C8F1 98 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 NR2F1P10589 423 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 ECHS1P30084 290 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 ERVS71-1P61550 626 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 GLO1Q04760 184 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 EGR4Q05215 589 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 CKAP4Q07065 602 aaKnown RBP13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 HLXQ14774 488 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 PCLAFQ15004 111 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 LIN52Q52LA3 116 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms