RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 RNF222A6NCQ9 220 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 WIPF3A6NGB9 483 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CCDC85CA6NKD9 419 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 ADM5C9JUS6 153 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CYR61O00622 381 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CDC40O60508 579 aaKnown RBP eCLIP2.54□□□□□ -2
NEDD4-204ENST00000503468 RGS9O75916 674 aaPredicted RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 JTBO76095 146 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 TOXO94900 526 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 RCBTB2O95199 551 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 RHOP08100 348 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 NR2F1P10589 423 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 IGFBP6P24592 240 aaPredicted RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 CXCR1P25024 350 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CSF2RBP32927 897 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 TAGLN2P37802 199 aaKnown RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 XCR1P46094 333 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 OMPP47874 163 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 DVL1P1P54792 670 aaPredicted RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 YPEL5P62699 121 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 FUT7Q11130 342 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 NFATC2Q13469 925 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 SLC10A1Q14973 349 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 PPA1Q15181 289 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 HNRNPA1L2Q32P51 320 aaKnown RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 ATAT1Q5SQI0 421 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 C10orf91Q5T1B1 145 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 GLT8D1Q68CQ7 371 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 PAQR3Q6TCH7 311 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 OVCH1Q7RTY7 1134 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 GPRIN1Q7Z2K8 1008 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 DTX1Q86Y01 620 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 VRK2Q86Y07 508 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CDK20Q8IZL9 346 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 RNF149Q8NC42 400 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 OR4E2Q8NGC2 313 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 OR52L1Q8NGH7 329 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 MRGPRDQ8TDS7 321 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 FAM122AQ96E09 287 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 SENP5Q96HI0 755 aaPredicted RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 PCED1BQ96HM7 432 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CELF6Q96J87 481 aaKnown RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 IMMP2LQ96T52 175 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 GAL3ST2Q9H3Q3 398 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 RGCCQ9H4X1 137 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 GHRLQ9UBU3 117 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 NDRG2Q9UN36 371 aaKnown RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 PCDHGA1Q9Y5H4 931 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 LINC01553A4QN01 128 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 OR5H15A6NDH6 313 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 OR5H1A6NKK0 313 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 INS-IGF2F8WCM5 200 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 SCAMP2O15127 329 aaKnown RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 RNF13O43567 381 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 SYT7O43581 403 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 SUSD5O60279 629 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 EIF3GO75821 320 aaKnown RBP eCLIP2.54□□□□□ -2
NEDD4-204ENST00000503468 CBX7O95931 251 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 IGHV2-5P01817 119 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 TRBC1P01850 177 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 RLN1P04808 185 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 ASGR1P07306 291 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 ADH1AP07327 375 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 C8GP07360 202 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 FHP07954 510 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CCL1P22362 96 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 MAS1LP35410 378 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 MC3RP41968 323 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CAV2P51636 162 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 SLC14A1Q13336 389 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 RSU1Q15404 277 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 DEFB115Q30KQ5 88 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CARD16Q5EG05 197 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 SOHLH1Q5JUK2 328 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 SFXN4Q6P4A7 337 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 PSRC1Q6PGN9 363 aaPredicted RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 VRK3Q8IV63 474 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 LRRC75AQ8NAA5 344 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 AQP11Q8NBQ7 271 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 OR4K5Q8NGD3 323 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 OR5M8Q8NGP6 311 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 OR4C6Q8NH72 309 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 TIFAQ96CG3 184 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 NECTIN4Q96NY8 510 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 PRRT1Q99946 306 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 CRB3Q9BUF7 120 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 PITPNC1Q9UKF7 332 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 SLC6A14Q9UN76 642 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 HS3ST4Q9Y661 456 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 PCNX2A6NKB5 2137 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 A0A087WZY1 265 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 ARL5CA6NH57 179 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 F5H5T6 163 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 DDX39AO00148 427 aaKnown RBP2.54□□□□□ -2
NEDD4-204ENST00000503468 MANBAO00462 879 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 PIAS2O75928 621 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 UBXN7O94888 489 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 GUCA1CO95843 209 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 BPNT1O95861 308 aa2.54□□□□□ -2
NEDD4-204ENST00000503468 AGR2O95994 175 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms