RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TEX29Q8N6K0 151 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 ADPRHL1Q8NDY3 354 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 MGARPQ8TDB4 240 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 TXNDC15Q96J42 360 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 TSPAN32Q96QS1 320 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 RSPO3Q9BXY4 272 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-212ENST00000498540 ARMC7Q9H6L4 198 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 TPT1P8Q9HAU6 139 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 CACYBPQ9HB71 228 aaKnown RBP12.56□□□□□ -0.4
TRAF4-212ENST00000498540 KLHL14Q9P2G3 628 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 RPS6KB2Q9UBS0 482 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 POFUT2Q9Y2G5 429 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 IFT52Q9Y366 437 aa12.56□□□□□ -0.4
TRAF4-212ENST00000498540 TRAV36DV7A0A075B6V5 113 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 A0A0G2JMP0 313 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 A0A0X1KG70 313 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 A0A1B0GWA3 101 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 BIRC5O15392 142 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 CLPTM1O96005 669 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 NUDT7P0C024 238 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 PATE4P0C8F1 98 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 NQO1P15559 274 aaKnown RBP12.55□□□□□ -0.4
TRAF4-212ENST00000498540 BGNP21810 368 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 CCL8P80075 99 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 CAMK2DQ13557 499 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 NKPD1Q17RQ9 610 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 C5orf46Q6UWT4 87 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 NHLRC1Q6VVB1 395 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 COMTD1Q86VU5 262 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 OR4M2Q8NGB6 313 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 FGFBP3Q8TAT2 258 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAF4-212ENST00000498540 SLC35B4Q969S0 331 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 SLC41A3Q96GZ6 507 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 LRR1Q96L50 414 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 ZBTB18Q99592 522 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 FOXB1Q99853 325 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 ULBP2Q9BZM5 246 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 ROPN1BQ9BZX4 212 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-212ENST00000498540 ROPN1Q9HAT0 212 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-212ENST00000498540 C12orf10Q9HB07 376 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 B3GAT2Q9NPZ5 323 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 SLC52A3Q9NQ40 469 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 TAAR3PQ9P1P4 343 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 SLC7A8Q9UHI5 535 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF346Q9UL40 294 aaKnown RBP12.55□□□□□ -0.4
TRAF4-212ENST00000498540 ARHGAP32A7KAX9 2087 aa12.55□□□□□ -0.4
TRAF4-212ENST00000498540 TRRAPQ9Y4A5 3859 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 A0A087WUJ7 227 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 C17orf100A8MU93 164 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 UBL3O95164 117 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 ANPEPP15144 967 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 UBA52P62987 128 aaKnown RBP12.54□□□□□ -0.4
TRAF4-212ENST00000498540 ALG10BQ5I7T1 473 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 NET1Q7Z628 596 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-212ENST00000498540 BPIFB2Q8N4F0 458 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 PAQR4Q8N4S7 273 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-212ENST00000498540 LSMEM1Q8N8F7 131 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 OR6N1Q8NGY5 312 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 C22orf15Q8WYQ4 148 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 MAL2Q969L2 176 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF747Q9BV97 191 aa12.54□□□□□ -0.4
TRAF4-212ENST00000498540 DENND2DQ9H6A0 471 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-212ENST00000498540 WDR55Q9H6Y2 383 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-212ENST00000498540 TMEM247A6NEH6 219 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF500O60304 480 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-212ENST00000498540 ANP32DO95626 131 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 BCL10O95999 233 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 IGHV2-5P01817 119 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 BGLAPP02818 100 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 IL6P05231 212 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 ZCCHC18P0CG32 403 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 FAM157BP0CG42 384 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 EPHA3P29320 983 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 ERVS71-1P61550 626 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 PDLIM3Q53GG5 364 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-212ENST00000498540 DCAF12L2Q5VW00 463 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 RGS7BPQ6MZT1 257 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-212ENST00000498540 SKA3Q8IX90 412 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 GLB1L3Q8NCI6 653 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-212ENST00000498540 NANPQ8TBE9 248 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 RNF217Q8TC41 542 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 GTF3AQ92664 365 aaKnown RBP12.53□□□□□ -0.4
TRAF4-212ENST00000498540 RAB39BQ96DA2 213 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 MOGAT1Q96PD6 335 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 OR51B6Q9H340 312 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 ZNF696Q9H7X3 374 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 BCL2L10Q9HD36 194 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 HINT3Q9NQE9 182 aaKnown RBP12.53□□□□□ -0.4
TRAF4-212ENST00000498540 PPIAL4AQ9Y536 164 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 CORINQ9Y5Q5 1042 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 CACNG2Q9Y698 323 aa12.53□□□□□ -0.4
TRAF4-212ENST00000498540 IGLV3-9A0A075B6K5 115 aa12.52□□□□□ -0.41
TRAF4-212ENST00000498540 IGHV1-69-2A0A0G2JMI3 117 aa12.52□□□□□ -0.41
TRAF4-212ENST00000498540 LRRN3E7EW58 273 aa12.52□□□□□ -0.41
TRAF4-212ENST00000498540 J3QLI3 93 aa12.52□□□□□ -0.41
TRAF4-212ENST00000498540 SERPINI2O75830 405 aa12.52□□□□□ -0.41
TRAF4-212ENST00000498540 FSHBP01225 129 aa12.52□□□□□ -0.41
TRAF4-212ENST00000498540 SERPINA5P05154 406 aa12.52□□□□□ -0.41
TRAF4-212ENST00000498540 CCL2P13500 99 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms