RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 OR5B21A6NL26 309 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 INS-IGF2F8WCM5 200 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 H0YHG0 523 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 POLR2DO15514 142 aaKnown RBP1.71□□□□□ -2.14
SMC4-227ENST00000497984 ATP5LO75964 103 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 DIRAS1O95057 198 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 KLHL38Q2WGJ6 581 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 ZBED5Q49AG3 693 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 SHISA6Q6ZSJ9 500 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 PIANPQ8IYJ0 282 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 ACOT4Q8N9L9 421 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 TRPV1Q8NER1 839 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 OR52H1Q8NGJ2 320 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 OR5W2Q8NH69 310 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 ZNF461Q8TAF7 563 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 TRMT10AQ8TBZ6 339 aaKnown RBP1.71□□□□□ -2.14
SMC4-227ENST00000497984 PYROXD1Q8WU10 500 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 RMI2Q96E14 147 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 CHAC1Q9BUX1 264 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 ULBP2Q9BZM5 246 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 SLCO1B3Q9NPD5 702 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 ZNRD1Q9P1U0 126 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 ZNF222Q9UK12 451 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 PACSIN2Q9UNF0 486 aaPredicted RBP1.71□□□□□ -2.14
SMC4-227ENST00000497984 N6AMT1Q9Y5N5 214 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 TMEM14AQ9Y6G1 99 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 GPR179Q6PRD1 2367 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 PCM1Q15154 2024 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 WDR62O43379 1518 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 A0A1B0GVX0 72 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 C7orf66A4D0T2 115 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 ANGPT2O15123 496 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 RAMP3O60896 148 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 FGF1P05230 155 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 POLR2MP0CAP2 368 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 IGHV1-8P0DP01 117 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 TCN1P20061 433 aaPredicted RBP1.7□□□□□ -2.14
SMC4-227ENST00000497984 PAX7P23759 505 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 NPBWR2P48146 333 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 GSSP48637 474 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 SLC7A9P82251 487 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 PDIA2Q13087 525 aaKnown RBP1.7□□□□□ -2.14
SMC4-227ENST00000497984 PDK4Q16654 411 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 DGUOKQ16854 277 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 USH1GQ495M9 461 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 SFT2D3Q587I9 215 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 DNLZQ5SXM8 178 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 BIVMQ86UB2 503 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 THOC6Q86W42 341 aaKnown RBP1.7□□□□□ -2.14
SMC4-227ENST00000497984 ZNF679Q8IYX0 411 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 GEMIN6Q8WXD5 167 aaKnown RBP1.7□□□□□ -2.14
SMC4-227ENST00000497984 RLN3Q8WXF3 142 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 CXorf40BQ96DE9 158 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 OR10C1Q96KK4 312 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 PARD6BQ9BYG5 372 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 SPNS1Q9H2V7 528 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 ZNF355PQ9NSJ1 428 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 SMOXQ9NWM0 555 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 BFARQ9NZS9 450 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 MMP17Q9ULZ9 603 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 MEMO1Q9Y316 297 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 RPAP1Q9BWH6 1393 aaPredicted RBP1.7□□□□□ -2.14
SMC4-227ENST00000497984 PIKFYVEQ9Y2I7 2098 aa1.7□□□□□ -2.14
SMC4-227ENST00000497984 PRRG1O14668 218 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 RRP8O43159 456 aaKnown RBP1.69□□□□□ -2.14
SMC4-227ENST00000497984 MGRN1O60291 552 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 GAPDHP04406 335 aaKnown RBP1.69□□□□□ -2.14
SMC4-227ENST00000497984 RNASE2P10153 161 aaKnown RBP1.69□□□□□ -2.14
SMC4-227ENST00000497984 ATP6V1C1P21283 382 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 ACAA2P42765 397 aaKnown RBP1.69□□□□□ -2.14
SMC4-227ENST00000497984 GPR6P46095 362 aaPredicted RBP1.69□□□□□ -2.14
SMC4-227ENST00000497984 CYB561P49447 251 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 DUSP3P51452 185 aaPredicted RBP1.69□□□□□ -2.14
SMC4-227ENST00000497984 CCR8P51685 355 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 SUB1P53999 127 aaKnown RBP eCLIP1.69□□□□□ -2.14
SMC4-227ENST00000497984 KLHL30Q0D2K2 578 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 AQP6Q13520 282 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 KCTD21Q4G0X4 260 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 FILIP1LQ4L180 1135 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 LRP11Q86VZ4 500 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 NUDCD3Q8IVD9 361 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 SYNPRQ8TBG9 265 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 EMG1Q92979 244 aaKnown RBP1.69□□□□□ -2.14
SMC4-227ENST00000497984 PDXPQ96GD0 296 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 OSBPL10Q9BXB5 764 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 RIBC2Q9H4K1 309 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 YY1AP1Q9H869 796 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 HMG20AQ9NP66 347 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 CHRNA9Q9UGM1 479 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 DOCK9Q9BZ29 2069 aa1.69□□□□□ -2.14
SMC4-227ENST00000497984 PTPRTO14522 1441 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 IGHV5-10-1A0A0J9YXX1 117 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 XPO1O14980 1071 aaKnown RBP1.68□□□□□ -2.14
SMC4-227ENST00000497984 ARPC3O15145 178 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 SRP72O76094 671 aaKnown RBP1.68□□□□□ -2.14
SMC4-227ENST00000497984 MPZL1O95297 269 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 KRT13P13646 458 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 HMGB2P26583 209 aaKnown RBP1.68□□□□□ -2.14
SMC4-227ENST00000497984 CCR1P32246 355 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 FDFT1P37268 417 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms