RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 PLEKHF2Q9H8W4 249 aa16.9■□□□□ 0.3
CTDSP1-213ENST00000496785 CRLF2Q9HC73 371 aa16.9■□□□□ 0.3
CTDSP1-213ENST00000496785 GPR35Q9HC97 309 aa16.9■□□□□ 0.3
CTDSP1-213ENST00000496785 ST6GALNAC2Q9UJ37 374 aa16.9■□□□□ 0.3
CTDSP1-213ENST00000496785 RNF115Q9Y4L5 304 aa16.9■□□□□ 0.3
CTDSP1-213ENST00000496785 SLC25A15Q9Y619 301 aa16.9■□□□□ 0.3
CTDSP1-213ENST00000496785 NAV2Q8IVL1 2488 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 M0R3G1 203 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 CLOCKO15516 846 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 GADD45GO95257 159 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 IGHG1P01857 330 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 RAF1P04049 648 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 HOXB6P17509 224 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 AQP2P41181 271 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 CAMK2DQ13557 499 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 CEACAM16Q2WEN9 425 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 FAM98BQ52LJ0 330 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 ALG10Q5BKT4 473 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 PAMR1Q6UXH9 720 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 ZNF704Q6ZNC4 412 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 TMPRSS11FQ6ZWK6 438 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 CCDC36Q8IYA8 594 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 CCDC124Q96CT7 223 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 MGAT4BQ9UQ53 548 aa16.89■□□□□ 0.29
CTDSP1-213ENST00000496785 MAST4O15021 2626 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 ZNF99A8MXY4 864 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 F13BP05160 661 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 PTAFRP25105 342 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 LOXP28300 417 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 IFNGR2P38484 337 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 RPS4XP62701 263 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 CHRNB3Q05901 458 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 LGALS3BPQ08380 585 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 KEAP1Q14145 624 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 TBRG1Q3YBR2 411 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 FAM205BPQ63HN1 556 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 PODNL1Q6PEZ8 512 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 C20orf204Q6ZNR8 217 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 PIWIL3Q7Z3Z3 882 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 RADILQ96JH8 1075 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 HS3ST6Q96QI5 342 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 SEPHS2Q99611 448 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 TMEM204Q9BSN7 226 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 GLTPQ9NZD2 209 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 TMCC3Q9ULS5 477 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 AURKCQ9UQB9 309 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 POFUT2Q9Y2G5 429 aa16.88■□□□□ 0.29
CTDSP1-213ENST00000496785 ARPC4-TTLL3A0A0A6YYG9 625 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 DNAJC8O75937 253 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 KRT36O76013 467 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 DIRAS1O95057 198 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 MAKP20794 623 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 CLRN1P58418 232 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 ARF1P84077 181 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 BNIP1Q12981 228 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 MELKQ14680 651 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 IQCCQ4KMZ1 466 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 SEZ6L2Q6UXD5 910 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 LINGO2Q7L985 606 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 WDR31Q8NA23 367 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 OR4K5Q8NGD3 323 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 OR52J3Q8NH60 311 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 FNDC8Q8TC99 324 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 BCL2L2Q92843 193 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 SLC7A6OSQ96CW6 309 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 TXNIPQ9H3M7 391 aa16.87■□□□□ 0.29
CTDSP1-213ENST00000496785 TCRBV5S2A0A599 114 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 RRM2P31350 389 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 MAGEA2P43356 314 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 GPR4P46093 362 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 MS4A2Q01362 244 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 BSPH1Q075Z2 132 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 ACKR1Q16570 336 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 ZBED5Q49AG3 693 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 HIKESHIQ53FT3 197 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 ADAM5Q6NVV9 412 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 TBPL2Q6SJ96 375 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 DEPDC4Q8N2C3 294 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 LINC00471Q8N535 108 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 OR51A7Q8NH64 312 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 MOSPD2Q8NHP6 518 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 ASB10Q8WXI3 467 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 NANOS1Q8WY41 292 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 TMEM54Q969K7 222 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 CLPTM1LQ96KA5 538 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 UBTD1Q9HAC8 227 aa16.86■□□□□ 0.29
CTDSP1-213ENST00000496785 ABCA4P78363 2273 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 TRBV4-1A0A0J9YWV2 114 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 A0A1W2PPR1 153 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 A0A1W2PR80 420 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 SH3PXD2BA1X283 911 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 AQP12BA6NM10 295 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 M0R1B8 84 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 IGHMP01871 453 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 PGA4P0DJD7 388 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 PGA3P0DJD8 388 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 FUT4P22083 530 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 ZNF83P51522 516 aa16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 LSM11P83369 360 aaKnown RBP eCLIP16.85■□□□□ 0.29
CTDSP1-213ENST00000496785 LAPTM4AQ15012 233 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms