RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 STK35Q8TDR2 534 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 DUSP19Q8WTR2 217 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 TMEM234Q8WY98 164 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 HSD17B8Q92506 261 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 SLC7A6Q92536 515 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ST6GAL2Q96JF0 529 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 CCDC74BQ96LY2 380 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 DERL3Q96Q80 235 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 SNX18Q96RF0 628 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 NLKQ9UBE8 527 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 IKZF2Q9UKS7 526 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 LAMA1P25391 3075 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 A0A0B4J203 849 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 A0A1B0GVC2 190 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 ANKUB1A6NFN9 424 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 A6NIN4 97 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 HSPB2A8KAH6 182 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 PIN1P1O15428 100 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 EEF1E1O43324 174 aaKnown RBP11.79□□□□□ -0.52
GARNL3-220ENST00000496711 UBL3O95164 117 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 IGHMP01871 453 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 TFPIP10646 304 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 AHCYP23526 432 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 HLA-DMAP28067 261 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 HOXA6P31267 233 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 FBXW4P57775 412 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 DCDP81605 110 aaKnown RBP11.79□□□□□ -0.52
GARNL3-220ENST00000496711 EGR3Q06889 387 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 HSPB2Q16082 182 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 ACKR1Q16570 336 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 LIPNQ5VXI9 398 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 PAPD4Q6PIY7 484 aaKnown RBP11.79□□□□□ -0.52
GARNL3-220ENST00000496711 C16orf47Q6ZP98 133 aaPredicted RBP11.79□□□□□ -0.52
GARNL3-220ENST00000496711 OR5AK2Q8NH90 309 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF671Q8TAW3 534 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 LGALS14Q8TCE9 139 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 UBASH3BQ8TF42 649 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 UPRTQ96BW1 309 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 MESP1Q9BRJ9 268 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 SLC25A18Q9H1K4 315 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 TSPAN10Q9H1Z9 355 aaPredicted RBP11.79□□□□□ -0.52
GARNL3-220ENST00000496711 PILRBQ9UKJ0 227 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 SPATA2Q9UM82 520 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 PPIEQ9UNP9 301 aaKnown RBP11.79□□□□□ -0.52
GARNL3-220ENST00000496711 FKBP7Q9Y680 259 aa11.79□□□□□ -0.52
GARNL3-220ENST00000496711 TRBV11-1A0A0K0K1C0 115 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 PRSS37A4D1T9 235 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 LANCL1O43813 399 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 TMEM127O75204 238 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 DXOO77932 396 aaKnown RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 OR6A2O95222 327 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ALOX5APP20292 161 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 MAPK3P27361 379 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 SUMO3P55854 103 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 PITPNAQ00169 270 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 TATDN3Q17R31 274 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 HLA-BQ31612 363 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 Q499Y3 187 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ZFP69Q49AA0 526 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 UBE2NLQ5JXB2 153 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 DPY19L4Q7Z388 723 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ST8SIA1Q92185 356 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF486Q96H40 463 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 MAP6Q96JE9 813 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 CMTM3Q96MX0 182 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ABHD1Q96SE0 405 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 OR11A1Q9GZK7 315 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 TXNIPQ9H3M7 391 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 FSCN3Q9NQT6 498 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 DDX28Q9NUL7 540 aaKnown RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 CLEC4AQ9UMR7 237 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 A8MV72 311 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 OR2T1O43869 369 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ORC5O43913 435 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF354AO60765 605 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 SLC43A1O75387 559 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 CENPAP49450 140 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 EMP2P54851 167 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 C17orf67Q0P5P2 114 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 GPR176Q14439 515 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF385CQ66K41 422 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ASB18Q6ZVZ8 466 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 CEP76Q8TAP6 659 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF417Q8TAU3 575 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 THAP3Q8WTV1 239 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 NAT6Q93015 286 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 HGDQ93099 445 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 CREB3L1Q96BA8 519 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ORAI1Q96D31 301 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF587Q96SQ5 575 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 GFI1Q99684 422 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 CTRCQ99895 268 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 MARVELD1Q9BSK0 173 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 MRPL39Q9NYK5 338 aaKnown RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 VSX1Q9NZR4 365 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 FRRS1LQ9P0K9 344 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 NUFIP1Q9UHK0 495 aaKnown RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 COLQQ9Y215 455 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-220ENST00000496711 ALG5Q9Y673 324 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms