RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	FXN	Q16595	210 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	TST	Q16762	297 aa	Known RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	GSTA3	Q16772	222 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	LRRC74B	Q6ZQY2	392 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	SYT9	Q86SS6	491 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	SERPINA11	Q86U17	422 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	WDFY1	Q8IWB7	410 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	PEX5L	Q8IYB4	626 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	TMEM123	Q8N131	208 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	BCL6B	Q8N143	479 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	CLIP4	Q8N3C7	705 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ICA1L	Q8NDH6	482 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	PIK3C3	Q8NEB9	887 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	OR8J2	Q8NGG1	315 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	OR52P1P	Q8NH57	321 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF417	Q8TAU3	575 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	KTI12	Q96EK9	354 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	APOPT1	Q96IL0	206 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	C1orf147	Q96MC9	270 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	TRNT1	Q96Q11	434 aa	Known RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF587	Q96SQ5	575 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	GAL3ST1	Q99999	423 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	EMC6	Q9BV81	110 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	TXLNGY	Q9BZA5	131 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	B3GNT2	Q9NY97	397 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	UBAP1	Q9NZ09	502 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	SLC17A7	Q9P2U7	560 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF69	Q9UC07	566 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF346	Q9UL40	294 aa	Known RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF443	Q9Y2A4	671 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	WIPI2	Q9Y4P8	454 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	IGHV1-69-2	A0A0G2JMI3	117 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	CCDC154	A6NI56	674 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	C17orf100	A8MU93	164 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	CLDN25	C9JDP6	229 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393		J3QLI3	93 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	AKAP8	O43823	692 aa	Known RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	NPIPB7	O75200	414 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	SERPINI2	O75830	405 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	HPR	P00739	348 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	FSHB	P01225	129 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	BCHE	P06276	602 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	HLA-DOB	P13765	273 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	MDK	P21741	143 aa	Predicted RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	OMG	P23515	440 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	PRTN3	P24158	256 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	GRPR	P30550	384 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	LSP1	P33241	339 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	S100A3	P33764	101 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	RBMX	P38159	391 aa	Known RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	MRPS11	P82912	194 aa	Known RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	EMX2	Q04743	252 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	EGR4	Q05215	589 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	BAMBI	Q13145	260 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	MAD2L1	Q13257	205 aa	Predicted RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	CASP8	Q14790	479 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	MAPK11	Q15759	364 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	LIN52	Q52LA3	116 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	ARMCX4	Q5H9R4	360 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	ANXA8L1	Q5VT79	327 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	RGS7BP	Q6MZT1	257 aa	Predicted RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	LEG1	Q6P5S2	330 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	TMEM154	Q6P9G4	183 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	USP51	Q70EK9	711 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	JAZF1	Q86VZ6	243 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	IFT20	Q8IY31	132 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	CCDC36	Q8IYA8	594 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	C20orf196	Q8IYI0	205 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF440	Q8IYI8	595 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	LRRC34	Q8IZ02	419 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	MIER2	Q8N344	545 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	PAQR4	Q8N4S7	273 aa	Predicted RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	VPS37A	Q8NEZ2	397 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	MFSD8	Q8NHS3	518 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	FGFBP3	Q8TAT2	258 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	STK35	Q8TDR2	534 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	SNX33	Q8WV41	574 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	UBLCP1	Q8WVY7	318 aa	Predicted RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	DVL3	Q92997	716 aa	Predicted RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	LRRC58	Q96CX6	371 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF48	Q96MX3	618 aa	Predicted RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF75A	Q96N20	296 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	OXGR1	Q96P68	337 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	PANX1	Q96RD7	426 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	PKP2	Q99959	881 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	RHOXF2	Q9BQY4	288 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	ULBP2	Q9BZM5	246 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF385D	Q9H6B1	395 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	AKTIP	Q9H8T0	292 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	MTHFD2L	Q9H903	347 aa	Predicted RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	NTN4	Q9HB63	628 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	HINT3	Q9NQE9	182 aa	Known RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	MED29	Q9NX70	200 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	ASIC5	Q9NY37	505 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF224	Q9NZL3	707 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	SLC7A8	Q9UHI5	535 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	POFUT2	Q9Y2G5	429 aa		6.67	□□□□□ -1.34
NVL-223	ENST00000496393	SOX21	Q9Y651	276 aa	Predicted RBP	6.67	□□□□□ -1.34
NVL-223	ENST00000496393	IGHV3OR16-10	A0A075B7F0	116 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms