RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ADRA2AP08913 450 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TFPIP10646 304 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 CD8BP10966 210 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 ICAM2P13598 275 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 AHCYP23526 432 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 PYCR1P32322 319 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 ACVR1BP36896 505 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 NAA10P41227 235 aaPredicted RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 EIF1P41567 113 aaKnown RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 RANBP1P43487 201 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TGM4P49221 684 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 GDI2P50395 445 aaKnown RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 LIMK1P53667 647 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 FBXW4P57775 412 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 RPL27P61353 136 aaKnown RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 FABP5Q01469 135 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 ZNF85Q03923 595 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 EGR3Q06889 387 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 SLC3A1Q07837 685 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 SNTA1Q13424 505 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 CDK5R1Q15078 307 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 CDONQ4KMG0 1287 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 HBMQ6B0K9 141 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 KCTD18Q6PI47 426 aaPredicted RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 XKRXQ6PP77 449 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 BAIAP2L2Q6UXY1 529 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TRILQ7L0X0 811 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 FAM122BQ7Z309 247 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TMPRSS9Q7Z410 1059 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 LYSMD2Q8IV50 215 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 ARIH2OSQ8N7S6 290 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 SCAIQ8N9R8 606 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 SYT14Q8NB59 555 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 ZNF485Q8NCK3 441 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 NPEPL1Q8NDH3 523 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 C19orf18Q8NEA5 215 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 NFAM1Q8NET5 270 aaPredicted RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 OR6N2Q8NGY6 317 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 MFSD8Q8NHS3 518 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 GPR119Q8TDV5 335 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 DUSP19Q8WTR2 217 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 THAP3Q8WTV1 239 aaPredicted RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 ASB17Q8WXJ9 295 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 ASB15Q8WXK1 588 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 PTP4A1Q93096 173 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 HGDQ93099 445 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 NXPE2Q96DL1 559 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 SPACA9Q96E40 222 aaPredicted RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 KTI12Q96EK9 354 aaPredicted RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 Q96M85 177 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 ADAD1Q96M93 576 aaKnown RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 INTS14Q96SY0 518 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 NMNAT3Q96T66 252 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TM9SF2Q99805 663 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TTYH2Q9BSA4 534 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 MRI1Q9BV20 369 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 HCAR1Q9BXC0 346 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 HDHD5Q9BXW7 423 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TXNIPQ9H3M7 391 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 WDR76Q9H967 626 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 SLC22A11Q9NSA0 550 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 OCIAD1Q9NX40 245 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 ALKBH4Q9NXW9 302 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 MRPL39Q9NYK5 338 aaKnown RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 MYOTQ9UBF9 498 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 FOXD3Q9UJU5 478 aaPredicted RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 IKZF2Q9UKS7 526 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 ADAM18Q9Y3Q7 739 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 MAP1BP46821 2468 aaKnown RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 A0A087WZY1 265 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 LOC102723996A0A087X1L8 192 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 TRBV2A0A0J9YWF9 115 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ZC3H12DA2A288 527 aaKnown RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 ANKRD61A6NGH8 418 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 NPIPB13A6NJU9 1138 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 PATE3B3GLJ2 98 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 NPIPB4C9JG80 1138 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 LRRN3E7EW58 273 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 AGRPO00253 132 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ARHGEF9O43307 516 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 OIP5O43482 229 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 GHRHP01286 108 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 F13BP05160 661 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 JMJD7P0C870 316 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 SP9P0CG40 484 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 CLUP10909 449 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 RAB3BP20337 219 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 VAMP1P23763 118 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ADH6P28332 368 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 GRPRP30550 384 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 TNFSF8P32971 234 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 NBL1P41271 181 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 SSR4P51571 173 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 BCAP31P51572 246 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 SIRPAP78324 504 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 GLO1Q04760 184 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 ZFP36L1Q07352 338 aaKnown RBP6.26□□□□□ -1.41
USP39-219ENST00000496047 PUDPQ08623 228 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 CDC20Q12834 499 aa6.26□□□□□ -1.41
USP39-219ENST00000496047 SELENBP1Q13228 472 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms