RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 OR4D11Q8NGI4 311 aa11.06□□□□□ -0.64
PTPRF-214ENST00000496043 NANOS1Q8WY41 292 aaKnown RBP11.06□□□□□ -0.64
PTPRF-214ENST00000496043 TAMM41Q96BW9 452 aa11.06□□□□□ -0.64
PTPRF-214ENST00000496043 ULBP2Q9BZM5 246 aa11.06□□□□□ -0.64
PTPRF-214ENST00000496043 SLC19A3Q9BZV2 496 aa11.06□□□□□ -0.64
PTPRF-214ENST00000496043 DENND2DQ9H6A0 471 aaPredicted RBP11.06□□□□□ -0.64
PTPRF-214ENST00000496043 NANSQ9NR45 359 aa11.06□□□□□ -0.64
PTPRF-214ENST00000496043 B3GNT2Q9NY97 397 aa11.06□□□□□ -0.64
PTPRF-214ENST00000496043 TAS2R5Q9NYW4 299 aa11.06□□□□□ -0.64
PTPRF-214ENST00000496043 SLC7A7Q9UM01 511 aa11.06□□□□□ -0.64
PTPRF-214ENST00000496043 A0A096LNT2 108 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 IGHV2OR16-5A0A0B4J2B6 119 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 LOC100653049A0A140TA62 436 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 A8MV72 311 aaPredicted RBP11.05□□□□□ -0.64
PTPRF-214ENST00000496043 RNF13O43567 381 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 KRT34O76011 436 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 SEC14L2O76054 403 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 LYPD3O95274 346 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 IFNA14P01570 189 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 CELA3BP08861 270 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 CD79AP11912 226 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 IFNGR1P15260 489 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 NPR2P20594 1047 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 USF1P22415 310 aaPredicted RBP11.05□□□□□ -0.64
PTPRF-214ENST00000496043 THBS4P35443 961 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 CSNK1A1P48729 337 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 BIDP55957 195 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 KLF10Q13118 480 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 MAPRE2Q15555 327 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 ZNF74Q16587 644 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 TMEM249Q2WGJ8 235 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 RABL3Q5HYI8 236 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 COQ5Q5HYK3 327 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 CYB5R2Q6BCY4 276 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 WDR88Q6ZMY6 472 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 SLC35D2Q76EJ3 337 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 ZNF627Q7L945 461 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 CALHM3Q86XJ0 350 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 HIPK1Q86Z02 1210 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 OR6X1Q8NH79 312 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 RAB1BQ9H0U4 201 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 PCDHAC1Q9H158 963 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 PLK3Q9H4B4 646 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 ZNF442Q9H7R0 627 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 SEC61A2Q9H9S3 476 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 MYOZ1Q9NP98 299 aaPredicted RBP11.05□□□□□ -0.64
PTPRF-214ENST00000496043 SAR1AQ9NR31 198 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 GID8Q9NWU2 228 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 ZNF229Q9UJW7 825 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 ADAM21Q9UKJ8 722 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 BAG5Q9UL15 447 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 SH3GLB1Q9Y371 365 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 SPEF1Q9Y4P9 236 aa11.05□□□□□ -0.64
PTPRF-214ENST00000496043 ABCA1O95477 2261 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 ZNF503-AS2A6NEH8 195 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 BBIP1A8MTZ0 92 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 NDUFS8O00217 210 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 MRASO14807 208 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 LY6HO94772 140 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 HLA-HP01893 362 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 ERCC1P07992 297 aaPredicted RBP11.04□□□□□ -0.64
PTPRF-214ENST00000496043 UMPSP11172 480 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 RAB1AP62820 205 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 LSM11P83369 360 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPRF-214ENST00000496043 VLDLRP98155 873 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 PIGFQ07326 219 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 SF3A3Q12874 501 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPRF-214ENST00000496043 DAG1Q14118 895 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 GSG1Q2KHT4 349 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 ERICH5Q6P6B1 374 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 PIWIL3Q7Z3Z3 882 aaKnown RBP11.04□□□□□ -0.64
PTPRF-214ENST00000496043 SPATA21Q7Z572 469 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 CARM1Q86X55 608 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 LRRC17Q8N6Y2 441 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 PCYOX1LQ8NBM8 494 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 C10orf82Q8WW14 230 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 TMEM54Q969K7 222 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 ZNF583Q96ND8 569 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 SORCS2Q96PQ0 1159 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 DOK1Q99704 481 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 FOXB1Q99853 325 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 FGFR1OP2Q9NVK5 253 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 GLTPQ9NZD2 209 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 JMJD1CQ15652 2540 aa11.04□□□□□ -0.64
PTPRF-214ENST00000496043 LOC390937A0A1W2PQ73 354 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 TMEM129A0AVI4 362 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 BLOC1S5-TXNDC5H3BN57 136 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 hCG_2039718K7EN88 272 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 KPNA4O00629 521 aaPredicted RBP11.03□□□□□ -0.64
PTPRF-214ENST00000496043 ENTPD5O75356 428 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 BCL10O95999 233 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 IFNA2P01563 188 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 ASAH2BP0C7U1 165 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 FUT1P19526 365 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 NR4A1P22736 598 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 PPOXP50336 477 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 CARTPTQ16568 116 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 REP15Q6BDI9 236 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 MYPOPQ86VE0 399 aaPredicted RBP11.03□□□□□ -0.64
PTPRF-214ENST00000496043 TSPYL5Q86VY4 417 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms