RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 KATNB1Q9BVA0 655 aa28.92■■■□□ 2.22
CBX4-203ENST00000494546 ULBP2Q9BZM5 246 aa28.92■■■□□ 2.22
CBX4-203ENST00000494546 EFCAB1Q9HAE3 211 aa28.92■■■□□ 2.22
CBX4-203ENST00000494546 BARX1Q9HBU1 254 aaPredicted RBP28.92■■■□□ 2.22
CBX4-203ENST00000494546 MOV10Q9HCE1 1003 aaKnown RBP28.92■■■□□ 2.22
CBX4-203ENST00000494546 ASAH2BP0C7U1 165 aa28.91■■■□□ 2.22
CBX4-203ENST00000494546 CECR9P0C854 216 aa28.91■■■□□ 2.22
CBX4-203ENST00000494546 APOBEC3AP31941 199 aaPredicted RBP28.91■■■□□ 2.22
CBX4-203ENST00000494546 ZP4Q12836 540 aa28.91■■■□□ 2.22
CBX4-203ENST00000494546 NANOGNBQ7Z5D8 188 aa28.91■■■□□ 2.22
CBX4-203ENST00000494546 PFN4Q8NHR9 129 aa28.91■■■□□ 2.22
CBX4-203ENST00000494546 SEC61A2Q9H9S3 476 aa28.91■■■□□ 2.22
CBX4-203ENST00000494546 POFUT2Q9Y2G5 429 aa28.91■■■□□ 2.22
CBX4-203ENST00000494546 MT-ND1P03886 318 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 CBR1P16152 277 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 RBM34P42696 430 aaKnown RBP28.9■■■□□ 2.22
CBX4-203ENST00000494546 CSNK1A1P48729 337 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 SLC7A2P52569 658 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 UGT2B15P54855 530 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 SELENOWP63302 87 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 NAAAQ02083 359 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 C3orf36Q3SXR2 165 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 SLC46A3Q7Z3Q1 461 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 LZICQ8WZA0 190 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 HOPXQ9BPY8 73 aaPredicted RBP28.9■■■□□ 2.22
CBX4-203ENST00000494546 PLCE1Q9P212 2302 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 ZFHX3Q15911 3703 aa28.9■■■□□ 2.22
CBX4-203ENST00000494546 ZNF503-AS2A6NEH8 195 aa28.89■■■□□ 2.22
CBX4-203ENST00000494546 IGLV1-44P01699 117 aa28.89■■■□□ 2.22
CBX4-203ENST00000494546 CELA3BP08861 270 aa28.89■■■□□ 2.22
CBX4-203ENST00000494546 NUDT2P50583 147 aa28.89■■■□□ 2.22
CBX4-203ENST00000494546 IDH3GP51553 393 aaPredicted RBP28.89■■■□□ 2.22
CBX4-203ENST00000494546 CCDC36Q8IYA8 594 aa28.89■■■□□ 2.22
CBX4-203ENST00000494546 FAM169BQ8N8A8 192 aa28.89■■■□□ 2.22
CBX4-203ENST00000494546 TMEM239Q8WW34 195 aa28.89■■■□□ 2.22
CBX4-203ENST00000494546 NF1P21359 2839 aa28.89■■■□□ 2.21
CBX4-203ENST00000494546 BLOC1S5-TXNDC5H3BN57 136 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 NME4O00746 187 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 GSTA4O15217 222 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 IGKV3-15P01624 115 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 NPRL3Q12980 569 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 MELKQ14680 651 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 ZNF813Q6ZN06 617 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 MDP1Q86V88 176 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 OR6X1Q8NH79 312 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 HTRA1Q92743 480 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 POM121Q96HA1 1249 aa28.88■■■□□ 2.21
CBX4-203ENST00000494546 RNF223E7ERA6 249 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 CXCR6O00574 342 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 SSX4O60224 188 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 HOXB4P17483 251 aaPredicted RBP28.87■■■□□ 2.21
CBX4-203ENST00000494546 FUT1P19526 365 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 NUDT6P53370 316 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 CHRNB3Q05901 458 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 RAB35Q15286 201 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 MYPOPQ86VE0 399 aaPredicted RBP28.87■■■□□ 2.21
CBX4-203ENST00000494546 FBXO17Q96EF6 278 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 SGTBQ96EQ0 304 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 C20orf141Q9NUB4 165 aa28.87■■■□□ 2.21
CBX4-203ENST00000494546 ALPK2Q86TB3 2170 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 OR7A10O76100 309 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 THRBP10828 461 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 BMP4P12644 408 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 B4GALT1P15291 398 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 CALCRP30988 508 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 ARR3P36575 388 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 C8orf82Q6P1X6 216 aaPredicted RBP28.86■■■□□ 2.21
CBX4-203ENST00000494546 VHLLQ6RSH7 139 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 HACD2Q6Y1H2 254 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 VTCN1Q7Z7D3 282 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 MAPK1IP1LQ8NDC0 245 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 ZNF566Q969W8 418 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 FOXB1Q99853 325 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 NSRP1Q9H0G5 558 aaKnown RBP28.86■■■□□ 2.21
CBX4-203ENST00000494546 MYLK2Q9H1R3 596 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 CA10Q9NS85 328 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 MED31Q9Y3C7 131 aa28.86■■■□□ 2.21
CBX4-203ENST00000494546 ZNF682O95780 498 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 BCL10O95999 233 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 HLA-HP01893 362 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 CD79AP11912 226 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 GSK3BP49841 420 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 TMEM54Q969K7 222 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 CMTM5Q96DZ9 223 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 PRRC1Q96M27 445 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 GLTPQ9NZD2 209 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 PMF1-BGLAPU3KQ54 211 aa28.85■■■□□ 2.21
CBX4-203ENST00000494546 IFNA8P32881 189 aa28.84■■■□□ 2.21
CBX4-203ENST00000494546 YAP1P46937 504 aaKnown RBP28.84■■■□□ 2.21
CBX4-203ENST00000494546 RPL18Q07020 188 aaKnown RBP28.84■■■□□ 2.21
CBX4-203ENST00000494546 ST3GAL3Q11203 375 aa28.84■■■□□ 2.21
CBX4-203ENST00000494546 ZNF627Q7L945 461 aa28.84■■■□□ 2.21
CBX4-203ENST00000494546 CPLX4Q7Z7G2 160 aa28.84■■■□□ 2.21
CBX4-203ENST00000494546 SLC25A44Q96H78 314 aaPredicted RBP28.84■■■□□ 2.21
CBX4-203ENST00000494546 REG4Q9BYZ8 158 aa28.84■■■□□ 2.21
CBX4-203ENST00000494546 A4GNTQ9UNA3 340 aa28.84■■■□□ 2.21
CBX4-203ENST00000494546 H7C417 338 aa28.83■■■□□ 2.21
CBX4-203ENST00000494546 F13BP05160 661 aa28.83■■■□□ 2.21
CBX4-203ENST00000494546 DRD4P21917 467 aa28.83■■■□□ 2.21
CBX4-203ENST00000494546 LSP1P33241 339 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms