RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MOGAT1Q96PD6 335 aa10.88□□□□□ -0.67
SKA1-205ENST00000494518 ULBP2Q9BZM5 246 aa10.88□□□□□ -0.67
SKA1-205ENST00000494518 RAD21L1Q9H4I0 556 aa10.88□□□□□ -0.67
SKA1-205ENST00000494518 C12orf10Q9HB07 376 aa10.88□□□□□ -0.67
SKA1-205ENST00000494518 B3GNT2Q9NY97 397 aa10.88□□□□□ -0.67
SKA1-205ENST00000494518 ZNF224Q9NZL3 707 aa10.88□□□□□ -0.67
SKA1-205ENST00000494518 SELENONQ9NZV5 590 aa10.88□□□□□ -0.67
SKA1-205ENST00000494518 REV1Q9UBZ9 1251 aa10.88□□□□□ -0.67
SKA1-205ENST00000494518 FAM157AC9JC47 383 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 WNT9BO14905 357 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 SYNGR3O43761 229 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 FZD7O75084 574 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 NAT2P11245 290 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 BMP2P12643 396 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 ETS2P15036 469 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 ZNF14P17017 642 aaPredicted RBP10.87□□□□□ -0.67
SKA1-205ENST00000494518 AHCYP23526 432 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 GPR6P46095 362 aaPredicted RBP10.87□□□□□ -0.67
SKA1-205ENST00000494518 MAGOHP61326 146 aaKnown RBP10.87□□□□□ -0.67
SKA1-205ENST00000494518 CDK6Q00534 326 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 RAB39AQ14964 217 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 OR1Q1Q15612 314 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 GKAP1Q5VSY0 366 aaPredicted RBP10.87□□□□□ -0.67
SKA1-205ENST00000494518 ULK3Q6PHR2 472 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 DHRS4L2Q6PKH6 230 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 LSMEM1Q8N8F7 131 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 CLDND2Q8NHS1 167 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 DNAJA4Q8WW22 397 aaPredicted RBP10.87□□□□□ -0.67
SKA1-205ENST00000494518 SLC35B4Q969S0 331 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 SLC47A1Q96FL8 570 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 ASPNQ9BXN1 380 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 OR51B6Q9H340 312 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 IKZF5Q9H5V7 419 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 METTL17Q9H7H0 456 aaPredicted RBP10.87□□□□□ -0.67
SKA1-205ENST00000494518 B3GAT2Q9NPZ5 323 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 NKIRAS1Q9NYS0 192 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 FBXO9Q9UK97 447 aaPredicted RBP10.87□□□□□ -0.67
SKA1-205ENST00000494518 PRDM4Q9UKN5 801 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 NOX1Q9Y5S8 564 aa10.87□□□□□ -0.67
SKA1-205ENST00000494518 A0A1W2PPW3 197 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 ZNF726A6NNF4 738 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 M0R3H8 397 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 TPST2O60704 377 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 NCR1O76036 304 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 VENTXO95231 258 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 RAB36O95755 333 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 ZNF35P13682 527 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 CSNK1A1P48729 337 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 DVL1P1P54792 670 aaPredicted RBP10.86□□□□□ -0.67
SKA1-205ENST00000494518 STX1BP61266 288 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 RAB1AP62820 205 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 GALK2Q01415 458 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 PUDPQ08623 228 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 SCARB2Q14108 478 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 PAGE3Q5JUK9 113 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 REEP3Q6NUK4 255 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 C5orf46Q6UWT4 87 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 NET1Q7Z628 596 aaPredicted RBP10.86□□□□□ -0.67
SKA1-205ENST00000494518 GLCCI1Q86VQ1 547 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 KRT73Q86Y46 540 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 CCDC36Q8IYA8 594 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 SMYD1Q8NB12 490 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 ADPRHL1Q8NDY3 354 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 IL17RDQ8NFM7 739 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 FGFBP3Q8TAT2 258 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 YIPF5Q969M3 257 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 ZNF75AQ96N20 296 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 EPYCQ99645 322 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 FOXB1Q99853 325 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 TMEM27Q9HBJ8 222 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 TREM2Q9NZC2 230 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 CCDC167Q9P0B6 97 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 VAPAQ9P0L0 249 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 TESQ9UGI8 421 aaKnown RBP10.86□□□□□ -0.67
SKA1-205ENST00000494518 DUSP13Q9UII6 198 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 SLC13A4Q9UKG4 626 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 USH1CQ9Y6N9 552 aa10.86□□□□□ -0.67
SKA1-205ENST00000494518 A0A0B4J2E0 115 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 LOC102725191A0A1B0GVB3 256 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 A0A1B0GX12 115 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 PLPP3O14495 311 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 PPIHO43447 177 aaKnown RBP10.85□□□□□ -0.67
SKA1-205ENST00000494518 FAM157BP0CG42 384 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 ADORA3P0DMS8 318 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 SAGP10523 405 aaPredicted RBP10.85□□□□□ -0.67
SKA1-205ENST00000494518 CCL2P13500 99 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 GLRXP35754 106 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 CDH12P55289 794 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 BIDP55957 195 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 MELKQ14680 651 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 FAM91A1Q658Y4 838 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 EPGNQ6UW88 154 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 FUNDC1Q8IVP5 155 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 SKA3Q8IX90 412 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 SCAIQ8N9R8 606 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 SPDL1Q96EA4 605 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 SLC41A3Q96GZ6 507 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 SPATA5L1Q9BVQ7 753 aa10.85□□□□□ -0.67
SKA1-205ENST00000494518 ZNF275Q9NSD4 429 aaPredicted RBP10.85□□□□□ -0.67
SKA1-205ENST00000494518 HIF1ANQ9NWT6 349 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms