RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 MRPS7Q9Y2R9 242 aaKnown RBP2.19□□□□□ -2.06
ITGB1-216ENST00000493758 DOCK9Q9BZ29 2069 aa2.19□□□□□ -2.06
ITGB1-216ENST00000493758 NFASCO94856 1347 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 A0A1B0GVX0 72 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 INS-IGF2F8WCM5 200 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 B3GALNT1O75752 331 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 CCDC130P13994 396 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 CCR1P32246 355 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 ELP6Q0PNE2 266 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 CHRFAM7AQ494W8 412 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 KCTD21Q4G0X4 260 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 LCN12Q6JVE5 192 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 DUX4L9Q6RFH8 374 aaPredicted RBP2.18□□□□□ -2.06
ITGB1-216ENST00000493758 NUDCD3Q8IVD9 361 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 PYROXD1Q8WU10 500 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 DNAJC19Q96DA6 116 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 CXorf40BQ96DE9 158 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 NIPAL2Q9H841 368 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 RMND5AQ9H871 391 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 LIN28AQ9H9Z2 209 aaKnown RBP2.18□□□□□ -2.06
ITGB1-216ENST00000493758 SLCO1B3Q9NPD5 702 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 MMP17Q9ULZ9 603 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 PACSIN2Q9UNF0 486 aaPredicted RBP2.18□□□□□ -2.06
ITGB1-216ENST00000493758 FRMPD3Q5JV73 1810 aa2.18□□□□□ -2.06
ITGB1-216ENST00000493758 RPAP1Q9BWH6 1393 aaPredicted RBP2.18□□□□□ -2.06
ITGB1-216ENST00000493758 WDR62O43379 1518 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 METTL21EPA6NDL7 271 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 H0YHG0 523 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 SMPD2O60906 423 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 ENTPD5O75356 428 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 UGT2B4P06133 528 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 HEXBP07686 556 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 HSPA5P11021 654 aaKnown RBP2.17□□□□□ -2.06
ITGB1-216ENST00000493758 PGAM1P18669 254 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 TCN1P20061 433 aaPredicted RBP2.17□□□□□ -2.06
ITGB1-216ENST00000493758 CNR1P21554 472 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 FDFT1P37268 417 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 GPR6P46095 362 aaPredicted RBP2.17□□□□□ -2.06
ITGB1-216ENST00000493758 GSSP48637 474 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 SUB1P53999 127 aaKnown RBP eCLIP2.17□□□□□ -2.06
ITGB1-216ENST00000493758 Q6ZPB1 254 aaPredicted RBP2.17□□□□□ -2.06
ITGB1-216ENST00000493758 PGAM4Q8N0Y7 254 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 STPG2Q8N412 459 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 MAGEE2Q8TD90 523 aaPredicted RBP2.17□□□□□ -2.06
ITGB1-216ENST00000493758 C16orf45Q96MC5 204 aaPredicted RBP2.17□□□□□ -2.06
ITGB1-216ENST00000493758 UGT1A7Q9HAW7 530 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 UGT1A10Q9HAW8 530 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 UGT1A8Q9HAW9 530 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 ZNF629Q9UEG4 869 aaPredicted RBP2.17□□□□□ -2.06
ITGB1-216ENST00000493758 GGA2Q9UJY4 613 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 KCNIP3Q9Y2W7 256 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 PLA2R1Q13018 1463 aa2.17□□□□□ -2.06
ITGB1-216ENST00000493758 TRAV40A0A0B4J280 105 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 K7EQM0 130 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 RCBTB2O95199 551 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 CLDN9O95484 217 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 DCNP07585 359 aaKnown RBP2.16□□□□□ -2.06
ITGB1-216ENST00000493758 IGHV1-8P0DP01 117 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 ZNF14P17017 642 aaPredicted RBP2.16□□□□□ -2.06
ITGB1-216ENST00000493758 HMGB2P26583 209 aaKnown RBP2.16□□□□□ -2.06
ITGB1-216ENST00000493758 CCR8P51685 355 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 SLC7A9P82251 487 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 PDIA2Q13087 525 aaKnown RBP2.16□□□□□ -2.06
ITGB1-216ENST00000493758 STK11Q15831 433 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 OR4F3Q6IEY1 312 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 ZNF880Q6PDB4 577 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 ZNF679Q8IYX0 411 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 MYOCDQ8IZQ8 938 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 FAM83FQ8NEG4 500 aaPredicted RBP2.16□□□□□ -2.06
ITGB1-216ENST00000493758 SLC38A2Q96QD8 506 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 ZNF607Q96SK3 696 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 KCTD14Q9BQ13 255 aaPredicted RBP2.16□□□□□ -2.06
ITGB1-216ENST00000493758 BFARQ9NZS9 450 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 N6AMT1Q9Y5N5 214 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 RFNGQ9Y644 331 aa2.16□□□□□ -2.06
ITGB1-216ENST00000493758 KIF26AQ9ULI4 1882 aaPredicted RBP2.16□□□□□ -2.06
ITGB1-216ENST00000493758 IGLV3-22A0A075B6J6 115 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 A0A1B0GVI7 797 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 NOL3O60936 208 aaKnown RBP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 PEX11AO75192 247 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 GAPDHP04406 335 aaKnown RBP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 UBTFL1P0CB47 393 aaPredicted RBP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 DBTP11182 482 aaKnown RBP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 CCT3P49368 545 aaKnown RBP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 NCBP2P52298 156 aaKnown RBP eCLIP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 CDK16Q00536 496 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 SCRN3Q0VDG4 424 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 PRSS8Q16651 343 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 DMRTC1Q5HYR2 192 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 BIVMQ86UB2 503 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 THOC6Q86W42 341 aaKnown RBP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 ZNF557Q8N988 423 aaPredicted RBP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 GMCL1P1Q8NEA9 526 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 RGP1Q92546 391 aaPredicted RBP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 THRSPQ92748 146 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 SECISBP2Q96T21 854 aaKnown RBP2.15□□□□□ -2.07
ITGB1-216ENST00000493758 CCT7Q99832 543 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 SH3GL3Q99963 347 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 OSBPL10Q9BXB5 764 aa2.15□□□□□ -2.07
ITGB1-216ENST00000493758 TMOD2Q9NZR1 351 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms