RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 PDIA2Q13087 525 aaKnown RBP2.22□□□□□ -2.05
SMC4-223ENST00000493695 FZD2Q14332 565 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 GK3PQ14409 553 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 PSG5Q15238 335 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 SGCAQ16586 387 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 KCTD21Q4G0X4 260 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 VAX1Q5SQQ9 334 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 UQCC3Q6UW78 93 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 LYPD2Q6UXB3 125 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 ACOT4Q8N9L9 421 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 OR1N2Q8NGR9 330 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 FANK1Q8TC84 345 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 MCOLN3Q8TDD5 553 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 C12orf42Q96LP6 360 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 MS4A4EQ96PG1 132 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 RIOK1Q9BRS2 568 aaKnown RBP2.22□□□□□ -2.05
SMC4-223ENST00000493695 PELOQ9BRX2 385 aaKnown RBP2.22□□□□□ -2.05
SMC4-223ENST00000493695 GON7Q9BXV9 100 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 MFFQ9GZY8 342 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 EXD2Q9NVH0 621 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 HYPKQ9NX55 129 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 N6AMT1Q9Y5N5 214 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 NPTNQ9Y639 398 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 PDS5BQ9NTI5 1447 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 A0A096LNJ9 63 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 IGKV1D-13A0A0B4J2D9 117 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 A0A1B0GVL5 298 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 SS18L1O75177 396 aaPredicted RBP2.21□□□□□ -2.06
SMC4-223ENST00000493695 IGKV1-13P0DP09 117 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 ATP1B2P14415 290 aaPredicted RBP2.21□□□□□ -2.06
SMC4-223ENST00000493695 ABOP16442 354 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 GYG1P46976 350 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 NMUP48645 174 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 FBXW4P57775 412 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 MRPL28Q13084 256 aaKnown RBP2.21□□□□□ -2.06
SMC4-223ENST00000493695 RSPO1Q2MKA7 263 aaPredicted RBP2.21□□□□□ -2.06
SMC4-223ENST00000493695 CEP55Q53EZ4 464 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 PIGGQ5H8A4 983 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 TRIM40Q6P9F5 258 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 KDELC1Q6UW63 502 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 UTS2BQ765I0 119 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 EGFL6Q8IUX8 553 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 ACER1Q8TDN7 264 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 PANX2Q96RD6 677 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 GPR61Q9BZJ8 451 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 NT5MQ9NPB1 228 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 ZNF226Q9NYT6 803 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 COX16Q9P0S2 106 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 MMP17Q9ULZ9 603 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 F11RQ9Y624 299 aaKnown RBP2.21□□□□□ -2.06
SMC4-223ENST00000493695 CARMIL3Q8ND23 1372 aa2.21□□□□□ -2.06
SMC4-223ENST00000493695 SCN2AQ99250 2005 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 PLAC8L1A1L4L8 177 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 GOLGA8SH3BPF8 625 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 MGRN1O60291 552 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 TOM1O60784 492 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 TMEM50AO95807 157 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 GIPP09681 153 aaPredicted RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 PNMA6AP0CW24 399 aaPredicted RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 HPGDP15428 266 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 TCN1P20061 433 aaPredicted RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 MX1P20591 662 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 OMGP23515 440 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 SSR1P43307 286 aaKnown RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 CRYBB2P43320 205 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 GPR6P46095 362 aaPredicted RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 TFPI2P48307 235 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 CCR6P51684 374 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 SUCLG1P53597 346 aaKnown RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 GUCA2BQ16661 112 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 TMEM135Q86UB9 458 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 PSTKQ8IV42 348 aaKnown RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 ZNF557Q8N988 423 aaPredicted RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 DUSP18Q8NEJ0 188 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 OR2L3Q8NG85 312 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 OR4F6Q8NGB9 312 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 OR13C2Q8NGS9 318 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 TMEM158Q8WZ71 300 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 ASB9Q96DX5 294 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 AURKBQ96GD4 344 aaPredicted RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 PLEKHA8Q96JA3 519 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 OR8B4Q96RC9 309 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 FMO2Q99518 471 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 SORT1Q99523 831 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 SH3GL1Q99961 368 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 SLC17A9Q9BYT1 436 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 ROPN1BQ9BZX4 212 aaPredicted RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 DNTTIP1Q9H147 329 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 UGT1A7Q9HAW7 530 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 UGT1A10Q9HAW8 530 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 UGT1A8Q9HAW9 530 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 ZFP14Q9HCL3 533 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 ADAP2Q9NPF8 381 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 CTPS2Q9NRF8 586 aa2.2□□□□□ -2.06
SMC4-223ENST00000493695 PACSIN2Q9UNF0 486 aaPredicted RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 KIF26AQ9ULI4 1882 aaPredicted RBP2.2□□□□□ -2.06
SMC4-223ENST00000493695 MAP3K15Q6ZN16 1313 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 PPIAL4EA0A075B759 164 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 A0A1B0GVI7 797 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 ZNF726A6NNF4 738 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms