RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 VMP1Q96GC9 406 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SMIM10Q96HG1 83 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 FER1L6-AS2Q96M78 137 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 RUNDC3BQ96NL0 473 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 AGAP4Q96P64 663 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 PPP1R2P1Q96PQ5 205 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TMEM237Q96Q45 408 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 CYTH2Q99418 400 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 GPR22Q99680 433 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ERP44Q9BS26 406 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TSSK1BQ9BXA7 367 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 MRPL1Q9BYD6 325 aaKnown RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SLC26A1Q9H2B4 701 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 WDR54Q9H977 334 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 PARVBQ9HBI1 364 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 FAM114A2Q9NRY5 505 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 PNPLA3Q9NST1 481 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF701Q9NV72 531 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-218ENST00000493430 DNAJC11Q9NVH1 559 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TAS2R13Q9NYV9 303 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TMEM216Q9P0N5 145 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 RHCGQ9UBD6 479 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SEC14L3Q9UDX4 400 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TBK1Q9UHD2 729 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF225Q9UK10 706 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 EMCNQ9ULC0 261 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 PCDHGB4Q9UN71 923 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SLC6A5Q9Y345 797 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 ATG4BQ9Y4P1 393 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 OARD1Q9Y530 152 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TIMM22Q9Y584 194 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 KLK4Q9Y5K2 254 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 SESN1Q9Y6P5 492 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 DOCK11Q5JSL3 2073 aa2.52□□□□□ -2.01
PTCD3-218ENST00000493430 TLN2Q9Y4G6 2542 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ATP6AP2A0A1C7CYW4 349 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 LRIT2A6NDA9 550 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 A8MT66 165 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 C17orf105B2RV13 164 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 C9JVG2 144 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 NPIPA2E9PIF3 369 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 NPIPA3F8WFD2 350 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 H0YC42 278 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 UBFD1O14562 309 aaKnown RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PGRMC2O15173 223 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ZSCAN12O43309 604 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 NME2P1O60361 137 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 SLC19A2O60779 497 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ATP6AP2O75787 350 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RSL1D1O76021 490 aaKnown RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 OPN1LWP04000 364 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 IFNA16P05015 189 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 C2P06681 752 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 HBQ1P09105 142 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 C1GALT1C1LP0DN25 315 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RNH1P13489 461 aaKnown RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 GFAPP14136 432 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 STMN1P16949 149 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ATP5A1P25705 553 aaKnown RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PIK3R1P27986 724 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 FEN1P39748 380 aaKnown RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 GP5P40197 560 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 CA7P43166 264 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 SSR2P43308 183 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RFX3P48380 749 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RGS4P49798 205 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 NAGLUP54802 743 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ADARP55265 1226 aaKnown RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 TPD52P55327 224 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RAB38P57729 211 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 NUP107P57740 925 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 FBXW4P57775 412 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 MLF1P58340 268 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RAB10P61026 200 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 CDK16Q00536 496 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 HMGCS1Q01581 520 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 TNFRSF17Q02223 184 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 IRF8Q02556 426 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 FOLH1Q04609 750 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ACTN3Q08043 901 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RGS1Q08116 209 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 STX5Q13190 355 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PDK4Q16654 411 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 C15orf32Q32M92 178 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 NDUFAF6Q330K2 333 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PDLIM3Q53GG5 364 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 EIPR1Q53HC9 387 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ACER2Q5QJU3 275 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 TEX35Q5T0J7 233 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RTL6Q6ICC9 239 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 OR5M10Q6IEU7 315 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 PRMT9Q6P2P2 845 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 SLC25A47Q6Q0C1 308 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 IGFL3Q6UXB1 125 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 TMIGD1Q6UXZ0 262 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 ZCCHC23Q6ZST2 131 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 C3orf62Q6ZUJ4 267 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 BTN2A1Q7KYR7 527 aa2.51□□□□□ -2.01
PTCD3-218ENST00000493430 RPS19BP1Q86WX3 136 aaKnown RBP2.51□□□□□ -2.01
PTCD3-218ENST00000493430 COMMD2Q86X83 199 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms