RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161		A0A1W2PPW3	197 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	LRRN3	E7EW58	273 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	OR2T1	O43869	369 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	ZNF500	O60304	480 aa	Predicted RBP	11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	ANP32D	O95626	131 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	BGLAP	P02818	100 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	ZCCHC18	P0CG32	403 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	ERVS71-1	P61550	626 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	CCL8	P80075	99 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	GALK2	Q01415	458 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	BST1	Q10588	318 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	STX3	Q13277	289 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	CAMK2D	Q13557	499 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	AWAT1	Q58HT5	328 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	SKA3	Q8IX90	412 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	ZDHHC22	Q8N966	263 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	GTF3A	Q92664	365 aa	Known RBP	11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	SLC41A3	Q96GZ6	507 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	LRR1	Q96L50	414 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	MOGAT1	Q96PD6	335 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	ZBTB18	Q99592	522 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	FOXB1	Q99853	325 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	RBM4	Q9BWF3	364 aa	Known RBP	11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	ARMC7	Q9H6L4	198 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	ZNF665	Q9H7R5	613 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	RPS6KB2	Q9UBS0	482 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	PCDHGB1	Q9Y5G3	927 aa		11.7	□□□□□ -0.54
SAMM50-204	ENST00000493161	AKAP8	O43823	692 aa	Known RBP	11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	TPST1	O60507	370 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	DEAF1	O75398	565 aa	Predicted RBP	11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	SLC22A3	O75751	556 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	SERPINI2	O75830	405 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	MPZL1	O95297	269 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	RAB36	O95755	333 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	IL6	P05231	212 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	FAM157B	P0CG42	384 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	CCL2	P13500	99 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	NQO1	P15559	274 aa	Known RBP	11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	MRPS11	P82912	194 aa	Known RBP	11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	SCGB2A2	Q13296	93 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	RGN	Q15493	299 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	GLIPR1L2	Q4G1C9	344 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	ACSM5	Q6NUN0	579 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	WDR88	Q6ZMY6	472 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	C1QL2	Q7Z5L3	287 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	MIER2	Q8N344	545 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	LSMEM1	Q8N8F7	131 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	ADPRHL1	Q8NDY3	354 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	OR6N1	Q8NGY5	312 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	C22orf15	Q8WYQ4	148 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	WFDC6	Q9BQY6	131 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	ZNF416	Q9BWM5	594 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	ULBP2	Q9BZM5	246 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	OR51B6	Q9H340	312 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	C12orf10	Q9HB07	376 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	BCL2L10	Q9HD36	194 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	TAAR3P	Q9P1P4	343 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	CACNG2	Q9Y698	323 aa		11.69	□□□□□ -0.54
SAMM50-204	ENST00000493161	TMPRSS2	O15393	492 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	RPS23	P62266	143 aa	Known RBP	11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	HNRNPA0	Q13151	305 aa	Known RBP	11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	NKPD1	Q17RQ9	610 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	PDCD4	Q53EL6	469 aa	Known RBP	11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	ALG10B	Q5I7T1	473 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	REP15	Q6BDI9	236 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	NET1	Q7Z628	596 aa	Predicted RBP	11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	C10orf111	Q8N326	155 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	OR9I1	Q8NGQ6	314 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	RNF217	Q8TC41	542 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	MGARP	Q8TDB4	240 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	AEN	Q8WTP8	325 aa	Known RBP	11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	SLC35B4	Q969S0	331 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	TMEM109	Q9BVC6	243 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	C1QTNF5	Q9BXJ0	243 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	ZNF385D	Q9H6B1	395 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	CACYBP	Q9HB71	228 aa	Known RBP	11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	A4GALT	Q9NPC4	353 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	B3GAT2	Q9NPZ5	323 aa		11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	HINT3	Q9NQE9	182 aa	Known RBP	11.68	□□□□□ -0.54
SAMM50-204	ENST00000493161	C17orf100	A8MU93	164 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	PLPP3	O14495	311 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	TPST2	O60704	377 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	UBL3	O95164	117 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	SERPINA5	P05154	406 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	KIT	P10721	976 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	HOXB9	P17482	250 aa	Predicted RBP	11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	AHCY	P23526	432 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	PMS2P3	Q13401	168 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	KRT71	Q3SY84	523 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	PRR31	Q5SQ13	230 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	C6orf10	Q5SRN2	563 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	NXN	Q6DKJ4	435 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	C5orf46	Q6UWT4	87 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	BBS10	Q8TAM1	723 aa		11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.67	□□□□□ -0.54
SAMM50-204	ENST00000493161	ITCH	Q96J02	903 aa		11.67	□□□□□ -0.54

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