RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 LIPAP38571 399 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 NUDT6P53370 316 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 TUBA1BP68363 451 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 SLC35A1P78382 337 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 PUDPQ08623 228 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 TUBA1AQ71U36 451 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 FAM122BQ7Z309 247 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 FAM109AQ8N4B1 249 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 EXTL1Q92935 676 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 ZHX1-C8orf76Q96EF9 292 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 AMBNQ9NP70 447 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 INIPQ9NRY2 104 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 GRHPRQ9UBQ7 328 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 KLHL21Q9UJP4 597 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 PCDHGB7Q9Y5F8 929 aa12.64□□□□□ -0.39
PDZRN3-210ENST00000492909 SNTNA6NMZ2 147 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 BOLA2-SMG1P6H3BVE0 249 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 IMPA2O14732 288 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 AKR7A3O95154 331 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 HIST1H1CP16403 213 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 POU3F2P20265 443 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 PAICSP22234 425 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 C21orf33P30042 268 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 SDHAP31040 664 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 CSNK2A1P68400 391 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 ZP4Q12836 540 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 SLC10A1Q14973 349 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 TIGD6Q17RP2 521 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF362Q5T0B9 420 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 GPR139Q6DWJ6 353 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 CXXC5Q7LFL8 322 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 BCDIN3DQ7Z5W3 292 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 ADPRHL1Q8NDY3 354 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF582Q96NG8 517 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 DCSTAMPQ9H295 470 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 ACKR4Q9NPB9 350 aa12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 HINT3Q9NQE9 182 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 CHCHD3Q9NX63 227 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-210ENST00000492909 ATMQ13315 3056 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 A0A0J9YW62 118 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 TEX13CA0A0J9YWL9 993 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 PRR23D1E9PI22 279 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 MS4A18H0YCH9 400 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 PRODHO43272 600 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 AIREO43918 545 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 SERPINI2O75830 405 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 TXNDC12O95881 172 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 PRR23D2P0DMB1 279 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 IRF3Q14653 427 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF169Q14929 603 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 TBR1Q16650 682 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 MS4A18Q3C1V0 323 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 EMC4Q5J8M3 183 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 NXNL2Q5VZ03 156 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 ESPNLQ6ZVH7 1005 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 CPOQ8IVL8 374 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 LSM14AQ8ND56 463 aaKnown RBP12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 OR52E2Q8NGJ4 325 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 OR4K13Q8NH42 304 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 RFKQ969G6 155 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 OTULINQ96BN8 352 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 RASD2Q96D21 266 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 Q96M85 177 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 DACH2Q96NX9 599 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 SLC6A15Q9H2J7 730 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 H2AFY2Q9P0M6 372 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 RPL36Q9Y3U8 105 aaKnown RBP12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 DNAJC13O75165 2243 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF407Q9C0G0 2248 aa12.62□□□□□ -0.39
PDZRN3-210ENST00000492909 A0A1W2PRG6 482 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 METTL15A6NJ78 407 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 FAM183AA6NL82 134 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 KDM4EB2RXH2 506 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 EIF1AYO14602 144 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 TNFSF11O14788 317 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 SEC14L5O43304 696 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 EIF1BO60739 113 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 PLGP00747 810 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 ZNF24P17028 368 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 TGFBR1P36897 503 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 STARP49675 285 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 CLDN20P56880 219 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 IFITM3Q01628 133 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 CRMP1Q14194 572 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 RNFT1Q5M7Z0 435 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 AADACL4Q5VUY2 407 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 PLBD1Q6P4A8 553 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 PAQR6Q6TCH4 344 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 USP43Q70EL4 1123 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 GGNQ86UU5 652 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 UBQLNLQ8IYU4 475 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 STX19Q8N4C7 294 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 TMEM99Q8N816 258 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 SLC37A3Q8NCC5 494 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 MCFD2Q8NI22 146 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 C9orf43Q8TAL5 461 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 TSPAN32Q96QS1 320 aa12.61□□□□□ -0.39
PDZRN3-210ENST00000492909 MMP27Q9H306 513 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms