RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 HOXB2P14652 356 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF23P17027 643 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 OMGP23515 440 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 S100GP29377 79 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 DDTP30046 118 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 HTR1FP30939 366 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 S100A11P31949 105 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 HSD17B3P37058 310 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 IFNGR2P38484 337 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 LGALS7P47929 136 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 GCLMP48507 274 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 FUT6P51993 359 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 UGT2B15P54855 530 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 KLF3P57682 345 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 RAP1AP62834 184 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ZXDAP98168 799 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 CDK3Q00526 305 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 TIAL1Q01085 375 aaKnown RBP eCLIP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 CD300CQ08708 224 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF616Q08AN1 781 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 TRAF3Q13114 568 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 EIF4HQ15056 248 aaKnown RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 PTGISQ16647 500 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 RPEL1Q2QD12 228 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 SPDYE7PQ495Y7 208 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 GPR33Q49SQ1 333 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ASPRV1Q53RT3 343 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 CARD16Q5EG05 197 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 SOHLH1Q5JUK2 328 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 LYPLAL1Q5VWZ2 237 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 SAMD13Q5VXD3 122 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 NSUN5P2Q63ZY6 315 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 GDF6Q6KF10 455 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 RGMBQ6NW40 437 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF585AQ6P3V2 769 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 SLC23A3Q6PIS1 610 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 PLET1Q6UQ28 207 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM205Q6UW68 189 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 UNQ9370/PRO34162Q6UXP9 181 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 CASP12Q6UXS9 341 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 Q6ZSR3 168 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 MON1BQ7L1V2 547 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 OR2W3Q7Z3T1 314 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 IRF2BP2Q7Z5L9 587 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 MARCH9Q86YJ5 346 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 C16orf71Q8IYS4 520 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 GALNT16Q8N428 558 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 METTL13Q8N6R0 699 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF283Q8N7M2 679 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF383Q8NA42 475 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 OR2Z1Q8NG97 314 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 OR5AU1Q8NGC0 362 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 OR10V1Q8NGI7 309 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 OR5AN1Q8NGI8 311 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 OR51F2Q8NH61 342 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ZFP28Q8NHY6 868 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 CASTOR1Q8WTX7 329 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 RNF138Q8WVD3 245 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 CENPNQ96H22 339 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 CXorf58Q96LI9 332 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 SGK494Q96LW2 274 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 GUCD1Q96NT3 240 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 BIRC8Q96P09 236 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 AGAP4Q96P64 663 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 TIMP4Q99727 224 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ZSWIM1Q9BR11 485 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 UGT2B28Q9BY64 529 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 PHPT1Q9NRX4 125 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 ECHDC1Q9NTX5 307 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 DCAF13Q9NV06 445 aaKnown RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 CLN6Q9NWW5 311 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 RASL12Q9NYN1 266 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM181Q9P2C4 612 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 THAP10Q9P2Z0 257 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 MYOTQ9UBF9 498 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 LHX3Q9UBR4 397 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 B3GNT3Q9Y2A9 372 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 SLC35A3Q9Y2D2 325 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 AMDHD2Q9Y303 409 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 UFC1Q9Y3C8 167 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 HSPB11Q9Y547 144 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 COLEC10Q9Y6Z7 277 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 AKAP11Q9UKA4 1901 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 SMARCA4P51532 1647 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 SYNJ2O15056 1496 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 MED23Q9ULK4 1368 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 CHD1O14646 1710 aa3.78□□□□□ -1.81
BRCA1-220ENST00000492859 A0A0G2JMP0 313 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 ZCWPW2A0A1B0GU75 182 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 SSU72P8A0A1W2PR75 194 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 A0A1W2PRF3 423 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 A0A1W2PRM7 423 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 LINC00862A6NCI5 91 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 OR6C68A6NDL8 312 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM8BA6NDV4 472 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 PRORSD1PA6NEY8 169 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 SLC22A20A6NK97 555 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 EFCAB9A8MZ26 197 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 BLOC1S5-TXNDC5H3BN57 136 aa3.77□□□□□ -1.81
BRCA1-220ENST00000492859 DLL1O00548 723 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms