RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ZNF367Q7RTV3 350 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 GPAT4Q86UL3 456 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 TSPYL5Q86VY4 417 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-213ENST00000492506 CCDC116Q8IYX3 515 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 OR8H2Q8N162 312 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 ZNF540Q8NDQ6 660 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 VANGL1Q8TAA9 524 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-213ENST00000492506 KAT2AQ92830 837 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 FBXW5Q969U6 566 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 TESCQ96BS2 214 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 C1GALT1C1Q96EU7 318 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 GMPPAQ96IJ6 420 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-213ENST00000492506 RANBP3Q9H6Z4 567 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-213ENST00000492506 FOLH1BQ9HBA9 442 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 PLSCR3Q9NRY6 295 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 GPR52Q9Y2T5 361 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 EMC9Q9Y3B6 208 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 RNF115Q9Y4L5 304 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 TNPO3Q9Y5L0 923 aaKnown RBP11.67□□□□□ -0.54
HDAC3-213ENST00000492506 ZNF780BQ9Y6R6 833 aa11.67□□□□□ -0.54
HDAC3-213ENST00000492506 FAM234BA2RU67 622 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 CST1P01037 141 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 CD8AP01732 235 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 GGT1P19440 569 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 ZP3P21754 424 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 LSM3P62310 102 aaKnown RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 STK11Q15831 433 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 SGCBQ16585 318 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 PGGHGQ32M88 737 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 GLYR1Q49A26 553 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 TECRLQ5HYJ1 363 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 NCMAPQ5T1S8 102 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 LAIR2Q6ISS4 152 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 SHQ1Q6PI26 577 aaKnown RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 SEZ6L2Q6UXD5 910 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 NRARPQ7Z6K4 114 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 ATG4DQ86TL0 474 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 OR9A2Q8NGT5 310 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 ENKURQ8TC29 256 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 SMAP2Q8WU79 429 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 S100PBPQ96BU1 408 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 C11orf24Q96F05 449 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 ADGRG7Q96K78 797 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 NSUN5Q96P11 429 aaKnown RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 DCLRE1CQ96SD1 692 aaKnown RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 PITX2Q99697 317 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 SMURF1Q9HCE7 757 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 RANGRFQ9HD47 186 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 MED9Q9NWA0 146 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 GDF2Q9UK05 429 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 UTS2RQ9UKP6 389 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 ING4Q9UNL4 249 aa11.66□□□□□ -0.54
HDAC3-213ENST00000492506 DIMT1Q9UNQ2 313 aaKnown RBP11.66□□□□□ -0.54
HDAC3-213ENST00000492506 LINC00854A0A1B0GVQ3 168 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 SHISA8B8ZZ34 492 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 PLOD3O60568 738 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 FADS2O95864 444 aaKnown RBP11.65□□□□□ -0.54
HDAC3-213ENST00000492506 PDYNP01213 254 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 IGFBP5P24593 272 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 CTBP2P56545 445 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 TRA2BP62995 288 aaKnown RBP11.65□□□□□ -0.54
HDAC3-213ENST00000492506 ZNF672Q499Z4 452 aaPredicted RBP11.65□□□□□ -0.54
HDAC3-213ENST00000492506 GGTA1PQ4G0N0 100 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 HSD17B12Q53GQ0 312 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 Q5BKY6 102 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 SGO1Q5FBB7 561 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 MFSD12Q6NUT3 480 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 TMEM65Q6PI78 240 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.65□□□□□ -0.54
HDAC3-213ENST00000492506 SLC44A2Q8IWA5 706 aaPredicted RBP11.65□□□□□ -0.54
HDAC3-213ENST00000492506 DEPDC4Q8N2C3 294 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 PTGR2Q8N8N7 351 aaPredicted RBP11.65□□□□□ -0.54
HDAC3-213ENST00000492506 CDYL2Q8N8U2 506 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 OR7G2Q8NG99 324 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 DUSP19Q8WTR2 217 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 PTP4A1Q93096 173 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 GTPBP3Q969Y2 492 aaKnown RBP11.65□□□□□ -0.54
HDAC3-213ENST00000492506 SEPHS2Q99611 448 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 EMC3Q9P0I2 261 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 MBD2Q9UBB5 411 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 CDC42EP3Q9UKI2 254 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 PCTPQ9UKL6 214 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 SNX6Q9UNH7 406 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 ABCG2Q9UNQ0 655 aa11.65□□□□□ -0.54
HDAC3-213ENST00000492506 IGHV4-30-2A0A087WSY4 118 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 IGLV3-32A0A0A0MS00 114 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 KRBOX1C9JBD0 128 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 EIF1AYO14602 144 aaKnown RBP11.64□□□□□ -0.55
HDAC3-213ENST00000492506 GCM2O75603 506 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-213ENST00000492506 IFNA14P01570 189 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 ADORA3P0DMS8 318 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 EIF1AXP47813 144 aaKnown RBP11.64□□□□□ -0.55
HDAC3-213ENST00000492506 RFX2P48378 723 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 HOXA1P49639 335 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-213ENST00000492506 RUNX1T1Q06455 604 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 MAD2L1BPQ15013 274 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-213ENST00000492506 GRK1Q15835 563 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms