RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CHP2O43745 196 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 EDF1O60869 148 aaKnown RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 STAMBPO95630 424 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 TACSTD2P09758 323 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 ASAH2BP0C7U1 165 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF23P17027 643 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 NPR2P20594 1047 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 GTF2E2P29084 291 aaKnown RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 AQP1P29972 269 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 PCGF2P35227 344 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 GZMKP49863 264 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF133P52736 654 aaPredicted RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 RIN1Q13671 783 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF74Q16587 644 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 HIST3H3Q16695 136 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 NRN1LQ496H8 165 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 PIWIL3Q7Z3Z3 882 aaKnown RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 PATL1Q86TB9 770 aaKnown RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 RANBP3LQ86VV4 465 aaPredicted RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 CALHM3Q86XJ0 350 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF786Q8N393 782 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 ANKS4BQ8N8V4 417 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF540Q8NDQ6 660 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 OR5J2Q8NH18 312 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 NEU4Q8WWR8 484 aaPredicted RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 LIPHQ8WWY8 451 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 HPS1Q92902 700 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 TAMM41Q96BW9 452 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 MSI2Q96DH6 328 aaKnown RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 MPP4Q96JB8 637 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 MCHR1Q99705 422 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 KCNS3Q9BQ31 491 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 PRSS27Q9BQR3 290 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 PIMREGQ9BSJ6 248 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 EMC6Q9BV81 110 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 ASPNQ9BXN1 380 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 RAB1BQ9H0U4 201 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 NOX3Q9HBY0 568 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 INTS9Q9NV88 658 aaKnown RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 MED29Q9NX70 200 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 LPAR3Q9UBY5 353 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 FKBP7Q9Y680 259 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 TRAPPC13A5PLN9 417 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 VSTM5A8MXK1 200 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 LRRN3E7EW58 273 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 hCG_2039718K7EN88 272 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 M0R3H8 397 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 FXYD1O00168 92 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 LMX1BO60663 402 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 LILRA1O75019 489 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 NPPAP01160 153 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 HLA-HP01893 362 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 H2AFXP16104 143 aaPredicted RBP7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 IGFBP5P24593 272 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 GLRXP35754 106 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 MTPNP58546 118 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 NCALDP61601 193 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 DAG1Q14118 895 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 GSG1Q2KHT4 349 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 COQ5Q5HYK3 327 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 ENTPD8Q5MY95 495 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 NANOGP8Q6NSW7 305 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 SLC46A3Q7Z3Q1 461 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 DHDDSQ86SQ9 333 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 SNX32Q86XE0 403 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 RBM45Q8IUH3 476 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF584Q8IVC4 421 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 SMYD1Q8NB12 490 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 ADAMTS16Q8TE57 1224 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 MRPL24Q96A35 216 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 KCNK17Q96T54 332 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 FOXB1Q99853 325 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 MRPL13Q9BYD1 178 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 BPESC1Q9GZL8 116 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 NANOGQ9H9S0 305 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 B3GAT2Q9NPZ5 323 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 MEPEQ9NQ76 525 aaPredicted RBP7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 SELENONQ9NZV5 590 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF229Q9UJW7 825 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 TRIM33Q9UPN9 1127 aa7.22□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF726A6NNF4 738 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 CENPBD1B2RD01 187 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 HAX1O00165 279 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 MGRN1O60291 552 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 SERPINA5P05154 406 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 PGA4P0DJD7 388 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 PGA3P0DJD8 388 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 ADORA3P0DMS8 318 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 DAOP14920 347 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 IFNGR1P15260 489 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 NQO1P15559 274 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 CBLP22681 906 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 MRPS11P82912 194 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 CAMK2DQ13557 499 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 CYP51A1Q16850 503 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 VMACQ2NL98 169 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 INTS11Q5TA45 600 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 CARD17Q5XLA6 110 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 ZNF813Q6ZN06 617 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms