RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 NMNAT1Q9HAN9 279 aaPredicted RBP11.13□□□□□ -0.63
SEC61A1-206ENST00000491668 TAS2R16Q9NYV7 291 aa11.13□□□□□ -0.63
SEC61A1-206ENST00000491668 SEC14L4Q9UDX3 406 aa11.13□□□□□ -0.63
SEC61A1-206ENST00000491668 TMCC3Q9ULS5 477 aa11.13□□□□□ -0.63
SEC61A1-206ENST00000491668 AP4S1Q9Y587 144 aa11.13□□□□□ -0.63
SEC61A1-206ENST00000491668 ABCA2Q9BZC7 2435 aa11.13□□□□□ -0.63
SEC61A1-206ENST00000491668 ALPK2Q86TB3 2170 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 SONP18583 2426 aaKnown RBP11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 IGKV1D-42A0A075B6H8 117 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 CIB4A0PJX0 185 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 H0YHG0 523 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 KPNA4O00629 521 aaPredicted RBP11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 ABCD4O14678 606 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 TMCC2O75069 709 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 FZD7O75084 574 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 NDUFS7O75251 213 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 GTF2E2P29084 291 aaKnown RBP11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 CDKN1AP38936 164 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 RBM34P42696 430 aaKnown RBP11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 MAGEA2P43356 314 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 ZNF83P51522 516 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 ATP5J2P56134 94 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 RPS4XP62701 263 aaKnown RBP11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 OR2T5Q6IEZ7 315 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 C5orf46Q6UWT4 87 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 CLEC9AQ6UXN8 241 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 B3GLCTQ6Y288 498 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 ZNF730Q6ZMV8 503 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 CREB3L2Q70SY1 520 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 LINGO2Q7L985 606 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 TSPYL5Q86VY4 417 aaPredicted RBP11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 NKAIN4Q8IVV8 208 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 OR2T29Q8NH02 315 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 STK35Q8TDR2 534 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 TMEM255BQ8WV15 326 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 TMEM239Q8WW34 195 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 PYDC1Q8WXC3 89 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 SLC25A36Q96CQ1 311 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 SF3B5Q9BWJ5 86 aaKnown RBP11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 C1QTNF6Q9BXI9 259 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 ANKRD19PQ9H560 264 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 REEP1Q9H902 201 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 KRCC1Q9NPI7 259 aaPredicted RBP11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 CISD1Q9NZ45 108 aaKnown RBP11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 MED31Q9Y3C7 131 aa11.12□□□□□ -0.63
SEC61A1-206ENST00000491668 A0A1W2PRQ8 180 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 E7EQL1 145 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 TNFRSF11BO00300 401 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 FFAR1O14842 300 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 SMAD7O15105 426 aaKnown RBP11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 DEAF1O75398 565 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 E2F6O75461 281 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 TIPRLO75663 272 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 KRT36O76013 467 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 THY1P04216 161 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 HEXAP06865 529 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 FCGR1AP12314 374 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 CD40P25942 277 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 RPS5P46782 204 aaKnown RBP11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 KRTAP1-1Q07627 177 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 DGCR6Q14129 220 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 AAED1Q7RTV5 226 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 TSEN54Q7Z6J9 526 aaKnown RBP11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 GPAT4Q86UL3 456 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 DTX2Q86UW9 622 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 CDK20Q8IZL9 346 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 KDM8Q8N371 416 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 MFSD8Q8NHS3 518 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 TMEM43Q9BTV4 400 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 BDH2Q9BUT1 245 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 TRAF4Q9BUZ4 470 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 SLC19A3Q9BZV2 496 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 PARPBPQ9NWS1 579 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 B3GAT1Q9P2W7 334 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 SAMHD1Q9Y3Z3 626 aaKnown RBP11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 HIVEP2P31629 2446 aa11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 ANK3Q12955 4377 aaKnown RBP11.11□□□□□ -0.63
SEC61A1-206ENST00000491668 TRAV36DV7A0A075B6V5 113 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 OR2T1O43869 369 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 ENTPD5O75356 428 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 PRSS23O95084 383 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 IGHV4-39P01824 125 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 FASP25445 335 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 MPGP29372 298 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 SELENOPP49908 381 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 ARHGDIAP52565 204 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 TNK1Q13470 666 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 HIKESHIQ53FT3 197 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 OR7E24Q6IFN5 339 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 PODNL1Q6PEZ8 512 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 LINC00114Q6XXX2 140 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 WDR88Q6ZMY6 472 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 DNM1P46Q6ZS02 220 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 SSX8Q7RTT4 187 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 PAPD5Q8NDF8 572 aaKnown RBP11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 C1orf162Q8NEQ5 155 aaPredicted RBP11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 PFN4Q8NHR9 129 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 ACOT11Q8WXI4 607 aaPredicted RBP11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 TAAR8Q969N4 342 aa11.1□□□□□ -0.63
SEC61A1-206ENST00000491668 SLCO4A1Q96BD0 722 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms