RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LGALS13Q9UHV8 139 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 DUSP13Q9UII6 198 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 C17orf100A8MU93 164 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 AIM2O14862 343 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 PRSS23O95084 383 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 BCHEP06276 602 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 HTR2AP28223 471 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 ERVS71-1P61550 626 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 RAB1AP62820 205 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 TXNL4AP83876 142 aaKnown RBP11.26□□□□□ -0.61
USF1-206ENST00000491629 ZP4Q12836 540 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 C1DQ13901 141 aaKnown RBP11.26□□□□□ -0.61
USF1-206ENST00000491629 TRMT5Q32P41 509 aaKnown RBP11.26□□□□□ -0.61
USF1-206ENST00000491629 REP15Q6BDI9 236 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 C6orf89Q6UWU4 347 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 H1FNTQ75WM6 255 aaPredicted RBP11.26□□□□□ -0.61
USF1-206ENST00000491629 VPS33AQ96AX1 596 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 SLC41A3Q96GZ6 507 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 LRR1Q96L50 414 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 NUF2Q9BZD4 464 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 SLC52A3Q9NQ40 469 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 TAAR3PQ9P1P4 343 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 CORINQ9Y5Q5 1042 aa11.26□□□□□ -0.61
USF1-206ENST00000491629 IGLV3-9A0A075B6K5 115 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 A0A0G2JMP0 313 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 A0A0X1KG70 313 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 LBPP18428 481 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 RBMXP38159 391 aaKnown RBP11.25□□□□□ -0.61
USF1-206ENST00000491629 CRYBB2P43320 205 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 CAMK2DQ13557 499 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 ZSCAN26Q16670 478 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 GTDC1Q4AE62 458 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 TMEM255AQ5JRV8 349 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 FAM69AQ5T7M9 428 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 GKAP1Q5VSY0 366 aaPredicted RBP11.25□□□□□ -0.61
USF1-206ENST00000491629 WDR88Q6ZMY6 472 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 SKA3Q8IX90 412 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 BPIFB2Q8N4F0 458 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 TRIML2Q8N7C3 387 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 SIGLECL1Q8N7X8 197 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 OR4M2Q8NGB6 313 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 NANPQ8TBE9 248 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 TMEM19Q96HH6 336 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 OR52E6Q96RD3 313 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 AIG1Q9NVV5 245 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 KLHL14Q9P2G3 628 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 P2RX2Q9UBL9 471 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 WIPI2Q9Y4P8 454 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 NOX1Q9Y5S8 564 aa11.25□□□□□ -0.61
USF1-206ENST00000491629 A0A1B0GWA3 101 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 A0A1W2PPW3 197 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 WDR91A4D1P6 747 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 LRRN3E7EW58 273 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 J3QLI3 93 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 BCL10O95999 233 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 BGLAPP02818 100 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 NUDT7P0C024 238 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 FAM157BP0CG42 384 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 CCL2P13500 99 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 ANPEPP15144 967 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 ZNF250P15622 560 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 CALRP27797 417 aaKnown RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 ABCE1P61221 599 aaKnown RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 RPS23P62266 143 aaKnown RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 FOXL1Q12952 345 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 LARS2Q15031 903 aaKnown RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 DCAF12L2Q5VW00 463 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 OGFOD2Q6N063 350 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 NUDCD3Q8IVD9 361 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 EIF1ADQ8N9N8 165 aaKnown RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 ADPRHL1Q8NDY3 354 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 BHLHE22Q8NFJ8 381 aaPredicted RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 ZNF48Q96MX3 618 aaPredicted RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 MOGAT1Q96PD6 335 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 FOXB1Q99853 325 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 C7orf69Q9H7B7 122 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 UNKLQ9H9P5 680 aaKnown RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 MEAF6Q9HAF1 191 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 HINT3Q9NQE9 182 aaKnown RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 PNPOQ9NVS9 261 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 SLC7A8Q9UHI5 535 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 HAO1Q9UJM8 370 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 ZNF346Q9UL40 294 aaKnown RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 RRP15Q9Y3B9 282 aaKnown RBP11.24□□□□□ -0.61
USF1-206ENST00000491629 RAP2CQ9Y3L5 183 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 GPR45Q9Y5Y3 372 aa11.24□□□□□ -0.61
USF1-206ENST00000491629 TRAV36DV7A0A075B6V5 113 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 A0A087WUJ7 227 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 IGHV1-69-2A0A0G2JMI3 117 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 A0A0G2JPF8 293 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 DNAJC9-AS1A6NH13 148 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 HNRNPCL2B2RXH8 293 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 HNRNPCL3B7ZW38 293 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 SDHDO14521 159 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 OR2T1O43869 369 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 HNRNPCL1O60812 293 aaKnown RBP11.23□□□□□ -0.61
USF1-206ENST00000491629 SERPINA5P05154 406 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 MYZAPP0CAP1 466 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms