RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PNMA8CA0A1B0GUJ8 204 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 TMEM150BA6NC51 233 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 RNF222A6NCQ9 220 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ZNF840PA6NDX5 716 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 GAGE12JA6NER3 117 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 FAM157AC9JC47 383 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 KLRC4-KLRK1H3BQV0 150 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 M0R296 226 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 NME4O00746 187 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ARPC2O15144 300 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 SLC16A5O15375 505 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 HSPA12AO43301 675 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 SLC28A2O43868 658 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 PSIP1O75475 530 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 NDUFA7O95182 113 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 CLDN7O95471 211 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 SEC24AO95486 1093 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 NADKO95544 446 aaPredicted RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 SNAP29O95721 258 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 GOT2P00505 430 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 IFNA2P01563 188 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 DCNP07585 359 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 FGF2P09038 288 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 UBCP0CG48 685 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 SMIM10L1P0DMW3 83 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 PSKH1P11801 424 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 CDH1P12830 882 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 B4GALT1P15291 398 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ANK1P16157 1881 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 GPX3P22352 226 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 FCARP24071 287 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 MPZP25189 248 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 CD82P27701 267 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 NUDT1P36639 197 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 POLR2IP36954 125 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 SLC26A3P40879 764 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 RFX3P48380 749 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 HCAR3P49019 387 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 STK19P49842 368 aaPredicted RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 MMP15P51511 669 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ACLYP53396 1101 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 GEMP55040 296 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 UCNP55089 124 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 PLP1P60201 277 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 RAB10P61026 200 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 CXCR4P61073 352 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 TFAMQ00059 246 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 ZNF33AQ06730 810 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 FCHO2Q0JRZ9 810 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 INCA1Q0VD86 236 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 MADCAM1Q13477 382 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 PRPSAP1Q14558 356 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 PAFAH1B3Q15102 231 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 PRTGQ2VWP7 1150 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ODF3L2Q3SX64 289 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 LIPKQ5VXJ0 399 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 SIGIRRQ6IA17 410 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 OR4F3Q6IEY1 312 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 FAM166AQ6J272 317 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 PRR5LQ6MZQ0 368 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 C3orf33Q6P1S2 294 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 PNCKQ6P2M8 343 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 PQLC2Q6ZP29 291 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 FAM183BPQ6ZVS7 135 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 LINGO2Q7L985 606 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 STRADAQ7RTN6 431 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 PTAR1Q7Z6K3 402 aaPredicted RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 ZNF546Q86UE3 836 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ZFAND4Q86XD8 727 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 CATSPERDQ86XM0 798 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ZBTB8OSQ8IWT0 167 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 RIMKLAQ8IXN7 391 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 DCP1BQ8IZD4 617 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 CMTM8Q8IZV2 173 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 CHDHQ8NE62 594 aaPredicted RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 GJC3Q8NFK1 279 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 OR4N2Q8NGD1 307 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 OR51G2Q8NGK0 314 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 OR5D18Q8NGL1 313 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 OR1J2Q8NGS2 313 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 OR13J1Q8NGT2 312 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 DYNC2LI1Q8TCX1 351 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 MAGEE2Q8TD90 523 aaPredicted RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 DTD1Q8TEA8 209 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ZFP90Q8TF47 636 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 FCAMRQ8WWV6 532 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 RORBQ92753 470 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 TMEM45BQ96B21 275 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 LRRC58Q96CX6 371 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 RNF183Q96D59 192 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 SMIM10Q96HG1 83 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 METTL2AQ96IZ6 378 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 PRMT6Q96LA8 375 aaPredicted RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 CSPG4P5Q96PW8 444 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 KCTD14Q9BQ13 255 aaPredicted RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 TRMT61BQ9BVS5 477 aaKnown RBP4.25□□□□□ -1.73
RTN4-215ENST00000491592 KIFC1Q9BW19 673 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ELOVL4Q9GZR5 314 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 SLC22A4Q9H015 551 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms