RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CTSFQ9UBX1 484 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 ZNF230Q9UIE0 474 aaPredicted RBP17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 SCN3AQ9NY46 2000 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 GXYLT2A0PJZ3 443 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 ADAM11O75078 769 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 PVALBP20472 110 aaPredicted RBP17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 RORAP35398 523 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 RAB28P51157 221 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 PPIAP62937 165 aaKnown RBP17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 DCST2Q5T1A1 773 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 YOD1Q5VVQ6 348 aaPredicted RBP17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 BEST3Q8N1M1 668 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 LRFN5Q96NI6 719 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 IER3IP1Q9Y5U9 82 aa17.65■□□□□ 0.42
SNAPC3-206ENST00000490969 ARPC4-TTLL3A0A0A6YYG9 625 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 TMEM218A2RU14 115 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 PAK4O96013 591 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 GDI1P31150 447 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 ST8SIA6P61647 398 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 BTN3A2P78410 334 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 GUCA2AQ02747 115 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 MLF2Q15773 248 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 ZNF528Q3MIS6 628 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 CBLN2Q8IUK8 224 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 RNF166Q96A37 237 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 ZNF337Q9Y3M9 751 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 PRR32B1ATL7 298 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 NGFRP08138 427 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 AK4P27144 223 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 GRPRP30550 384 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 TSFMP43897 325 aaKnown RBP17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 SOX2P48431 317 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 PLAURQ03405 335 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 GUCA2BQ16661 112 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 HNRNPA1L2Q32P51 320 aaKnown RBP17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 Q499Y3 187 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 LRRTM1Q86UE6 522 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 C12orf45Q8N5I9 185 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 OR6K6Q8NGW6 343 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 WFIKKN2Q8TEU8 576 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 INSM2Q96T92 566 aaPredicted RBP17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 ZNF559Q9BR84 538 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 C1orf198Q9H425 327 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 POFUT1Q9H488 388 aa17.64■□□□□ 0.41
SNAPC3-206ENST00000490969 A0A0B4J2E0 115 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 A0A1B0GX12 115 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 BCL2L11O43521 198 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 ADRB3P13945 408 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 MANEAQ5SRI9 462 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 ERN2Q76MJ5 926 aaKnown RBP17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 OR4N5Q8IXE1 308 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 SLC43A2Q8N370 569 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 DOK4Q8TEW6 326 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 PHYHIPLQ96FC7 376 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 LGR4Q9BXB1 951 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 GPR174Q9BXC1 333 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 FAM117AQ9C073 453 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 ALX4Q9H161 411 aaPredicted RBP17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 FLRT3Q9NZU0 649 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 PCDHB10Q9UN67 800 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 MEIS3P1A6NDR6 274 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 GGT3PA6NGU5 568 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 H0YC42 278 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 IMPA2O14732 288 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 CD8AP01732 235 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 CSF2RBP32927 897 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 RFC3P40938 356 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 ZNF345Q14585 488 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 MICBQ29980 383 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 MTSS1LQ765P7 747 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 TDHQ8IZJ6 230 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 OR1S2Q8NGQ3 325 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 ADAT1Q9BUB4 502 aaKnown RBP17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 ZNF471Q9BX82 626 aaPredicted RBP17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 GPN3Q9UHW5 284 aaPredicted RBP17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 ADAM18Q9Y3Q7 739 aa17.63■□□□□ 0.41
SNAPC3-206ENST00000490969 OR5H14A6NHG9 310 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 MCIDASD6RGH6 385 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 SLC25A12O75746 678 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 RPP14O95059 124 aaKnown RBP17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 NDUFB2O95178 105 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 PMS2P2O95744 297 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 CD3DP04234 171 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 TNFRSF17Q02223 184 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 SNTB1Q13884 538 aaKnown RBP17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 PDGFRLQ15198 375 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 PAN3Q58A45 887 aaKnown RBP17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 GLT8D1Q68CQ7 371 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 ARMC10Q8N2F6 343 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 STEAP2Q8NFT2 490 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 OR1M1Q8NGA1 313 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 CCDC107Q8WV48 283 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 NMNAT3Q96T66 252 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 VRK1Q99986 396 aaPredicted RBP17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 ZNF576Q9H609 170 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 ADAP2Q9NPF8 381 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 TNFSF18Q9UNG2 199 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 A0A1B0GVT2 93 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 A0A1B0GWA3 101 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms