RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 NANPQ8TBE9 248 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 MARCH1Q8TCQ1 289 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 MAIP1Q8WWC4 291 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 NRGNQ92686 78 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 TOP1MTQ969P6 601 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 ZNF578Q96N58 590 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 SLC38A2Q96QD8 506 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 SLC29A1Q99808 456 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 TMEM175Q9BSA9 504 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 TM6SF2Q9BZW4 377 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 ILKAPQ9H0C8 392 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 HDHD2Q9H0R4 259 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 RHOJQ9H4E5 214 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 RANBP3Q9H6Z4 567 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 PSTPIP2Q9H939 334 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 NANOGQ9H9S0 305 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 DYRK4Q9NR20 520 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 LYARQ9NX58 379 aaKnown RBP3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 IFNKQ9P0W0 207 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 RIMS3Q9UJD0 308 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 UBQLN1Q9UMX0 589 aaKnown RBP3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 SBNO1A3KN83 1393 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 ARHGAP23Q9P227 1491 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 GOLGA8QA0A0J9YX86 632 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 LOC100131303A0A0U1RQF7 123 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 A0A1W2PNV4 684 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 RAB19A4D1S5 217 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 EIF3HO15372 352 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 HCN1O60741 890 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR2J3O76001 311 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 HPNP05981 417 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 CCL2P13500 99 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 ZNF24P17028 368 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 FUT3P21217 361 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 TBXA2RP21731 343 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 UGT1A5P35504 534 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 HPCAL1P37235 193 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 HAAOP46952 286 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 UQCRFS1P47985 274 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 CAV2P51636 162 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 ZNF133P52736 654 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 PLP1P60201 277 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 MYL6P60660 151 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 EWSR1Q01844 656 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 IRF8Q02556 426 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 RIPPLY1Q0D2K3 151 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 GK3PQ14409 553 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 CAPRIN1Q14444 709 aaKnown RBP3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 HERPUD1Q15011 391 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 TMEM52BQ4KMG9 183 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 C6orf183Q5T699 404 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 CLEC6AQ6EIG7 209 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 PTRHD1Q6GMV3 140 aaKnown RBP3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 FAHD2BQ6P2I3 314 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 UQCC3Q6UW78 93 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 HSDL2Q6YN16 418 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 NDUFAF7Q7L592 441 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 COPS6Q7L5N1 327 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 SNX20Q7Z614 316 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 MOB3BQ86TA1 216 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 TMEM252Q8N6L7 170 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 ZNF565Q8N9K5 539 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR2L3Q8NG85 312 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR2AP1Q8NGE2 309 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 DTX3LQ8TDB6 740 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 ASB9Q96DX5 294 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 FAHD2AQ96GK7 314 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 CYP2S1Q96SQ9 504 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 TUBGCP2Q9BSJ2 902 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR52A5Q9H2C5 316 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 GLIPR2Q9H4G4 154 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 MRPL47Q9HD33 250 aaKnown RBP3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 SDHAF3Q9NRP4 125 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 DCDC2Q9UHG0 476 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 PRPF19Q9UMS4 504 aaKnown RBP3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 FLVCR2Q9UPI3 526 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 MEMO1Q9Y316 297 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 STARD10Q9Y365 291 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 TIMM10BQ9Y5J6 103 aa3.34□□□□□ -1.87
HMGB1P38-201ENST00000490557 PNPLA6Q8IY17 1366 aa3.34□□□□□ -1.88
HMGB1P38-201ENST00000490557 RAI1Q7Z5J4 1906 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 IGHV1OR15-1A0A075B7D0 117 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 GSTTP1A0A1W2PQM5 241 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 WI2-2373I1.2A0A1W2PRP0 233 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 SMCO2A6NFE2 343 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 TRPC5OSA6NMA1 111 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 A8MUA0 341 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 NPIPA7E9PJI5 369 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 DLGAP1O14490 977 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 CLOCKO15516 846 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 KDELR3O43731 214 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 CALUO43852 315 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 GLAP06280 429 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 ALOX5P09917 674 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 NPIPA8P0DM63 369 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 STOMP27105 288 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 CD1CP29017 333 aa3.33□□□□□ -1.88
HMGB1P38-201ENST00000490557 RPL13AP40429 203 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms