RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 C17orf100A8MU93 164 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 PRSS23O95084 383 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 CLPTM1O96005 669 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 IGHV2-5P01817 119 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 ALDOCP09972 364 aaKnown RBP11.91□□□□□ -0.5
VARS-227ENST00000489979 PATE4P0C8F1 98 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 ARAFP10398 606 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 FPR2P25090 351 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 LSP1P33241 339 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 CRATP43155 626 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 ETV4P43268 484 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 DSTNP60981 165 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 ABCE1P61221 599 aaKnown RBP11.91□□□□□ -0.5
VARS-227ENST00000489979 RGS7BPQ6MZT1 257 aaPredicted RBP11.91□□□□□ -0.5
VARS-227ENST00000489979 C6orf89Q6UWU4 347 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 TREML4Q6UXN2 200 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 ZNF584Q8IVC4 421 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 WDFY1Q8IWB7 410 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 EIF1ADQ8N9N8 165 aaKnown RBP11.91□□□□□ -0.5
VARS-227ENST00000489979 SLC38A4Q969I6 547 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 TMEM19Q96HH6 336 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 TXNDC15Q96J42 360 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 TSPAN32Q96QS1 320 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 FOXB1Q99853 325 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 DENND2DQ9H6A0 471 aaPredicted RBP11.91□□□□□ -0.5
VARS-227ENST00000489979 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 NTN4Q9HB63 628 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 CACYBPQ9HB71 228 aaKnown RBP11.91□□□□□ -0.5
VARS-227ENST00000489979 HINT3Q9NQE9 182 aaKnown RBP11.91□□□□□ -0.5
VARS-227ENST00000489979 SLC6A13Q9NSD5 602 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 MED29Q9NX70 200 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 RPS6KB2Q9UBS0 482 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 OPN4Q9UHM6 478 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 LGALS13Q9UHV8 139 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 RAP2CQ9Y3L5 183 aa11.91□□□□□ -0.5
VARS-227ENST00000489979 IGKV1D-42A0A075B6H8 117 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 TRAV36DV7A0A075B6V5 113 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 A0A0G2JPF8 293 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 HNRNPCL2B2RXH8 293 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 HNRNPCL3B7ZW38 293 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 RFXANKO14593 260 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 HNRNPCL1O60812 293 aaKnown RBP11.9□□□□□ -0.5
VARS-227ENST00000489979 UBL3O95164 117 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 SERPINE1P05121 402 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 FAM157BP0CG42 384 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 HNRNPCL4P0DMR1 293 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 NQO1P15559 274 aaKnown RBP11.9□□□□□ -0.5
VARS-227ENST00000489979 RAD52P43351 418 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 RPL14P50914 215 aaKnown RBP11.9□□□□□ -0.5
VARS-227ENST00000489979 LRRC74AQ0VAA2 488 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 CAMK2DQ13557 499 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 TMEM154Q6P9G4 183 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 NET1Q7Z628 596 aaPredicted RBP11.9□□□□□ -0.5
VARS-227ENST00000489979 ADPRHL1Q8NDY3 354 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 OR6N1Q8NGY5 312 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 FGFBP3Q8TAT2 258 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 C1QTNF5Q9BXJ0 243 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 ULBP2Q9BZM5 246 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 C12orf10Q9HB07 376 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 AIG1Q9NVV5 245 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 KLHL14Q9P2G3 628 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 GPR160Q9UJ42 338 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 FBXL3Q9UKT7 428 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 IFT52Q9Y366 437 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 WIPI2Q9Y4P8 454 aa11.9□□□□□ -0.5
VARS-227ENST00000489979 A0A087WUJ7 227 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 IGHV1-69-2A0A0G2JMI3 117 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 A0A1B0GWA3 101 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 ZNF726A6NNF4 738 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 TYROBPO43914 113 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 FSHBP01225 129 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 SERPINA5P05154 406 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 CRYBB2P43320 205 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 SELENOVP59797 346 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 TEKQ02763 1124 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 PCGF3Q3KNV8 242 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 MMEL1Q495T6 779 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 OGFOD2Q6N063 350 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 C5orf46Q6UWT4 87 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 ZNF771Q7L3S4 317 aaPredicted RBP11.89□□□□□ -0.51
VARS-227ENST00000489979 SNX32Q86XE0 403 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 SKA3Q8IX90 412 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 MIER2Q8N344 545 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 PAQR4Q8N4S7 273 aaPredicted RBP11.89□□□□□ -0.51
VARS-227ENST00000489979 SIGLECL1Q8N7X8 197 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 SYNPRQ8TBG9 265 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 SNX33Q8WV41 574 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 DVL3Q92997 716 aaPredicted RBP11.89□□□□□ -0.51
VARS-227ENST00000489979 DUX5Q96PT3 197 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 SORT1Q99523 831 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 ZBTB18Q99592 522 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 OR51B6Q9H340 312 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 UNKLQ9H9P5 680 aaKnown RBP11.89□□□□□ -0.51
VARS-227ENST00000489979 MEAF6Q9HAF1 191 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 TPT1P8Q9HAU6 139 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.89□□□□□ -0.51
VARS-227ENST00000489979 CACNG2Q9Y698 323 aa11.89□□□□□ -0.51
VARS-227ENST00000489979 IGLV3-9A0A075B6K5 115 aa11.88□□□□□ -0.51
VARS-227ENST00000489979 TMEM247A6NEH6 219 aa11.88□□□□□ -0.51
VARS-227ENST00000489979 CLDN25C9JDP6 229 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms