RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TDP1Q9NUW8 608 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 RNF181Q9P0P0 153 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 FOXJ3Q9UPW0 622 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC27A6Q9Y2P4 619 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GPR52Q9Y2T5 361 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CHTOPQ9Y3Y2 248 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 WIF1Q9Y5W5 379 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ADAMTSL1Q8N6G6 1762 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF831Q5JPB2 1677 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PDCD11Q14690 1871 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 COL11A1P12107 1806 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TRBV23OR9-2A0A075B6M9 112 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TEX13DA0A0J9YY54 714 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 DAPL1A0PJW8 107 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR5H15A6NDH6 313 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR5H1A6NKK0 313 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 FAM157AC9JC47 383 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HHLA1C9JL84 531 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 H0Y8X5 98 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 H7C417 338 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 M0R143 59 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PPP1R2P9O14990 202 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 NPC1O15118 1278 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 SURF4O15260 269 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GMFGO60234 142 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CYTIPO60759 359 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GGCTO75223 188 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GLCEO94923 617 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 FGBP02675 491 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ANXA4P09525 319 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CSF1P09603 554 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 NID1P14543 1247 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CSF2RAP15509 400 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF7P17097 686 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 MAOAP21397 527 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 DPP4P27487 766 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HTR2CP28335 458 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CD1CP29017 333 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 AKR1C3P42330 323 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OMPP47874 163 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PPM1FP49593 454 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CASP9P55211 416 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 UBE2MP61081 183 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 SKP1P63208 163 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 MRPS11P82912 194 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ARHGAP1Q07960 439 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TSPAN31Q12999 210 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ODF1Q14990 250 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNHIT3Q15649 155 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 RPE65Q16518 533 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 BEX5Q5H9J7 111 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 MS4A13Q5J8X5 152 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM69Q5SWH9 247 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 DMKNQ6E0U4 476 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 DHRS11Q6UWP2 260 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 METTL7BQ6UX53 244 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 UNQ6126/PRO20091Q6UXV3 157 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HEPN1Q6WQI6 88 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 SLCO4C1Q6ZQN7 724 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 DCXRQ7Z4W1 244 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ADCK2Q7Z695 626 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GID4Q8IVV7 300 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HIST3H2BBQ8N257 126 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 LRRC18Q8N456 261 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 BPIFB2Q8N4F0 458 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PAQR4Q8N4S7 273 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF610Q8N9Z0 462 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HSD17B11Q8NBQ5 300 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ACBD4Q8NC06 268 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 STEAP2Q8NFT2 490 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR7G2Q8NG99 324 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR6T1Q8NGN1 323 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR5M8Q8NGP6 311 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR1J1Q8NGS3 322 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR9A4Q8NGU2 314 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 M1APQ8TC57 530 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 IFI44Q8TCB0 444 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 DUSP19Q8WTR2 217 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 LINC01599Q8WXQ3 324 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 OR8D1Q8WZ84 308 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 RELTQ969Z4 430 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 TM4SF18Q96CE8 201 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GALNT14Q96FL9 552 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 RCC1LQ96I51 464 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 AKR1E2Q96JD6 320 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 GPA33Q99795 319 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 MICU1Q9BPX6 476 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ATG101Q9BSB4 218 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 PLA2G12AQ9BZM1 189 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CIPCQ9C0C6 399 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ATG5Q9H1Y0 275 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 NKX2-4Q9H2Z4 354 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HRH4Q9H3N8 390 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 RGCCQ9H4X1 137 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 FKRPQ9H9S5 495 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 A4GALTQ9NPC4 353 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF230Q9UIE0 474 aaPredicted RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 KCNE5Q9UJ90 142 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 A4GNTQ9UNA3 340 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 HS3ST4Q9Y661 456 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms