RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 C19orf25Q9UFG5 118 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SDK2Q58EX2 2172 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 FRYQ5TBA9 3013 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 DMXL2Q8TDJ6 3036 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 IGHV5-10-1A0A0J9YXX1 117 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 VSTM2BA6NLU5 285 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 A8MVM7 634 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 ETV2O00321 342 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 PDCD5O14737 125 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 HCRTR2O43614 444 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 FADS1O60427 444 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 FZD7O75084 574 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 ICOSLGO75144 302 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 NPIPB7O75200 414 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 SLC25A12O75746 678 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 RENP00797 406 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 UCHL1P09936 223 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 FKBP2P26885 142 aaKnown RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 MAPK3P27361 379 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 ABCD3P28288 659 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 TACR3P29371 465 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 PYCR1P32322 319 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 CD79BP40259 229 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 NR4A2P43354 598 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 SCAND1P57086 179 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 RNF4P78317 190 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 DCDP81605 110 aaKnown RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 TAGLNQ01995 201 aaKnown RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF117Q03924 483 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 MXD1Q05195 221 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 EGR3Q06889 387 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 C17orf67Q0P5P2 114 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 EIF3IQ13347 325 aaKnown RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 NNATQ16517 81 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 NKAIN1Q4KMZ8 207 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 YIF1BQ5BJH7 314 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 FAM205BPQ63HN1 556 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF544Q6NX49 715 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 MZT2BQ6NZ67 158 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 CCBE1Q6UXH8 406 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 FAM220AQ7Z4H9 259 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 CDH24Q86UP0 819 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 OR8H2Q8N162 312 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 METTL27Q8N6F8 245 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 Q8N9G6 341 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 FAM83FQ8NEG4 500 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 OR4K13Q8NH42 304 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 SNRNP27Q8WVK2 155 aaKnown RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 METTL21AQ8WXB1 218 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 DEPDC7Q96QD5 511 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 GAL3ST4Q96RP7 486 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 KCNJ15Q99712 375 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 NUDT22Q9BRQ3 303 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 MED20Q9H944 212 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 WDR54Q9H977 334 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 MARCH7Q9H992 704 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 CYSLTR2Q9NS75 346 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 GRHPRQ9UBQ7 328 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 ST6GALNAC2Q9UJ37 374 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 RARRES3Q9UL19 164 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 YARS2Q9Y2Z4 477 aaKnown RBP7.66□□□□□ -1.18
VTI1A-207ENST00000489357 FER1L5A0AVI2 2057 aa7.66□□□□□ -1.18
VTI1A-207ENST00000489357 OR6C68A6NDL8 312 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 TRABD2BA6NFA1 517 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 NOTOA8MTQ0 251 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 J3QLW9 94 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 LRRTM2O43300 516 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 BGLAPP02818 100 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 RAF1P04049 648 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 CD63P08962 238 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF19P17023 458 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 NPR2P20594 1047 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 MST1P26927 711 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 APEX1P27695 318 aaKnown RBP7.65□□□□□ -1.18
VTI1A-207ENST00000489357 GTF2E2P29084 291 aaKnown RBP7.65□□□□□ -1.18
VTI1A-207ENST00000489357 EVI2BP34910 448 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 APOBEC1P41238 236 aaKnown RBP7.65□□□□□ -1.18
VTI1A-207ENST00000489357 GSK3AP49840 483 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 GDI2P50395 445 aaKnown RBP7.65□□□□□ -1.18
VTI1A-207ENST00000489357 CCR4P51679 360 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 NR0B1P51843 470 aaKnown RBP7.65□□□□□ -1.18
VTI1A-207ENST00000489357 CTXN1P60606 82 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 PITPNAQ00169 270 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 EGR4Q05215 589 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 RPL18Q07020 188 aaKnown RBP7.65□□□□□ -1.18
VTI1A-207ENST00000489357 ACSM3Q53FZ2 586 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 VWA2Q5GFL6 755 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 ZMAT1Q5H9K5 638 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF684Q5T5D7 378 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 LINC01590Q5TEZ4 76 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 AGAP6Q5VW22 663 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 TRIQKQ629K1 86 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 ARL9Q6T311 187 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 CBLN3Q6UW01 205 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 UNQ9370/PRO34162Q6UXP9 181 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 APOOLQ6UXV4 268 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 COX15Q7KZN9 410 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 GDPD3Q7L5L3 318 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 AKAP14Q86UN6 197 aa7.65□□□□□ -1.18
VTI1A-207ENST00000489357 RAB43Q86YS6 212 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms