RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 LHFPL3Q86UP9 236 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 ZNF557Q8N988 423 aaPredicted RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 FAM184AQ8NB25 1140 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 C7orf33Q8WU49 177 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 ANKRD49Q8WVL7 239 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 ACOT11Q8WXI4 607 aaPredicted RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 PIBF1Q8WXW3 757 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 FAM122AQ96E09 287 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 CCDC126Q96EE4 140 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 RARRES2Q99969 163 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 TMEM246Q9BRR3 403 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 NICN1Q9BSH3 213 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 RIOK2Q9BVS4 552 aaKnown RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 TEKT3Q9BXF9 490 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 IQCGQ9H095 443 aaKnown RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 DNTTIP1Q9H147 329 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 SH2D2AQ9NP31 389 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 C20orf96Q9NUD7 363 aaPredicted RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 GPATCH2LQ9NWQ4 482 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 QPCTLQ9NXS2 382 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 CALYQ9NYX4 217 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 TP53TG3Q9ULZ0 132 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 ZNF256Q9Y2P7 627 aaPredicted RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 EPOPA6NHQ4 379 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 LRRIQ3A6PVS8 624 aaPredicted RBP3.1□□□□□ -1.91
XRN1-213ENST00000489241 ERVV-1B6SEH8 477 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 C12orf77C9JDV5 145 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 GOLGA8TH3BQL2 631 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 BOLA2-SMG1P6H3BVE0 249 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 AIM2O14862 343 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 AGPAT2O15120 278 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 IGKV3-15P01624 115 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 TCN1P20061 433 aaPredicted RBP3.1□□□□□ -1.91
XRN1-213ENST00000489241 GSTM3P21266 225 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 STOMP27105 288 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 BTCP35070 178 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 RORAP35398 523 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 UQCRFS1P47985 274 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 APOC4P55056 127 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 CLDN8P56748 225 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 MAB21L1Q13394 359 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 KYAT1Q16773 422 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 SOHLH1Q5JUK2 328 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 VAX1Q5SQQ9 334 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 C9orf129Q5T035 196 aaKnown RBP3.1□□□□□ -1.91
XRN1-213ENST00000489241 GPR157Q5UAW9 335 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 CERS6Q6ZMG9 384 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 ZNF620Q6ZNG0 422 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 RFLNAQ6ZTI6 216 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 SSX9Q7RTT3 188 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 SLC16A14Q7RTX9 510 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 TMEM179BQ7Z7N9 219 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 ZNF100Q8IYN0 542 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 BBS1Q8NFJ9 593 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 OR9G1Q8NH87 305 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 ISG20Q96AZ6 181 aaKnown RBP3.1□□□□□ -1.91
XRN1-213ENST00000489241 RPUSD4Q96CM3 377 aaKnown RBP3.1□□□□□ -1.91
XRN1-213ENST00000489241 PLEKHF1Q96S99 279 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 POLR2J2Q9GZM3 115 aaKnown RBP3.1□□□□□ -1.91
XRN1-213ENST00000489241 POLR2J3Q9H1A7 115 aaKnown RBP3.1□□□□□ -1.91
XRN1-213ENST00000489241 UGT1A10Q9HAW8 530 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 IL26Q9NPH9 171 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 LYARQ9NX58 379 aaKnown RBP3.1□□□□□ -1.91
XRN1-213ENST00000489241 ASF1AQ9Y294 204 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 CHTOPQ9Y3Y2 248 aaKnown RBP3.1□□□□□ -1.91
XRN1-213ENST00000489241 CNTNAP1P78357 1384 aa3.1□□□□□ -1.91
XRN1-213ENST00000489241 IGKV6D-41A0A0C4DH26 115 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 ZFP92A6NM28 416 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 SIRPB1O00241 398 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 MGRN1O60291 552 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 CMA1P23946 247 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 COX7A1P24310 79 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 DCKP27707 260 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 CDKN1BP46527 198 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 RFX3P48380 749 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 YWHAGP61981 247 aaKnown RBP eCLIP3.09□□□□□ -1.91
XRN1-213ENST00000489241 PAX5Q02548 391 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 IRF8Q02556 426 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 DOC2AQ14183 400 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 ITIH4Q14624 930 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 RSBN1Q5VWQ0 802 aaPredicted RBP3.09□□□□□ -1.91
XRN1-213ENST00000489241 LIX1Q8N485 282 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 EID2Q8N6I1 236 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 ZNF321PQ8N8H1 164 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 ZNF740Q8NDX6 193 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 MARCH1Q8TCQ1 289 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 ZNF75CPQ92670 426 aaPredicted RBP3.09□□□□□ -1.91
XRN1-213ENST00000489241 ARPC1AQ92747 370 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 C8orf44Q96CB5 159 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 PRRC1Q96M27 445 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 ANKRD60Q9BZ19 345 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 OR51J1Q9H342 316 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 ELOVL6Q9H5J4 265 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 MRPL47Q9HD33 250 aaKnown RBP3.09□□□□□ -1.91
XRN1-213ENST00000489241 LYRM4Q9HD34 91 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 MRPS30Q9NP92 439 aaKnown RBP3.09□□□□□ -1.91
XRN1-213ENST00000489241 PRR34Q9NV39 138 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 EXD2Q9NVH0 621 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 AHSPQ9NZD4 102 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 CLCF1Q9UBD9 225 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms