RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TSTQ16762 297 aaKnown RBP13.74□□□□□ -0.21
USP48-210ENST00000489108 HFEQ30201 348 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 MS4A18Q3C1V0 323 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 KLF17Q5JT82 389 aaPredicted RBP13.74□□□□□ -0.21
USP48-210ENST00000489108 SPANXN4Q5MJ08 99 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 H1FNTQ75WM6 255 aaPredicted RBP13.74□□□□□ -0.21
USP48-210ENST00000489108 SERPINA11Q86U17 422 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 ZNF584Q8IVC4 421 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 FGFBP3Q8TAT2 258 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 SYNPRQ8TBG9 265 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 SNX33Q8WV41 574 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 GTF3AQ92664 365 aaKnown RBP13.74□□□□□ -0.21
USP48-210ENST00000489108 POP5Q969H6 163 aaKnown RBP13.74□□□□□ -0.21
USP48-210ENST00000489108 TAAR8Q969N4 342 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 SLC25A28Q96A46 364 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 TIMD4Q96H15 378 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 PPP1R36Q96LQ0 422 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 PKP2Q99959 881 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 GAL3ST1Q99999 423 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 OR51B6Q9H340 312 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 DENND2DQ9H6A0 471 aaPredicted RBP13.74□□□□□ -0.21
USP48-210ENST00000489108 DECR2Q9NUI1 292 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 PLEK2Q9NYT0 353 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 LEF1Q9UJU2 399 aaPredicted RBP13.74□□□□□ -0.21
USP48-210ENST00000489108 CHST2Q9Y4C5 530 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 IGLV3-9A0A075B6K5 115 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 LOC102725191A0A1B0GVB3 256 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 HPRP00739 348 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 SERPINA5P05154 406 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 ZNF250P15622 560 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 OMGP23515 440 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 GRPRP30550 384 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 ANXA11P50995 505 aaKnown RBP13.73□□□□□ -0.21
USP48-210ENST00000489108 ATP4BP51164 291 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 ERVS71-1P61550 626 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 SLC9A3R2Q15599 337 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 SMU1Q2TAY7 513 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 LIN52Q52LA3 116 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 ARMCX4Q5H9R4 360 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 SKA3Q8IX90 412 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 PAQR4Q8N4S7 273 aaPredicted RBP13.73□□□□□ -0.21
USP48-210ENST00000489108 DEFB108BQ8NET1 73 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 PNPT1Q8TCS8 783 aaKnown RBP13.73□□□□□ -0.21
USP48-210ENST00000489108 TESCQ96BS2 214 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 TXNDC15Q96J42 360 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 LRR1Q96L50 414 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 CCDC115Q96NT0 180 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 FOXB1Q99853 325 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 AKTIPQ9H8T0 292 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 MMP26Q9NRE1 261 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 SLCO1C1Q9NYB5 712 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 UBAP1Q9NZ09 502 aa13.73□□□□□ -0.21
USP48-210ENST00000489108 PDP1Q9P0J1 537 aaPredicted RBP13.73□□□□□ -0.21
USP48-210ENST00000489108 ZNF443Q9Y2A4 671 aaPredicted RBP13.73□□□□□ -0.21
USP48-210ENST00000489108 SLC22A23A1A5C7 686 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 ZNF500O60304 480 aaPredicted RBP13.72□□□□□ -0.21
USP48-210ENST00000489108 FZD7O75084 574 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 UBL3O95164 117 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 CCL2P13500 99 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 S100A3P33764 101 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 HOXC5Q00444 222 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 ZNF621Q6ZSS3 439 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 UEVLDQ8IX04 471 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 LRRC34Q8IZ02 419 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 GLB1L3Q8NCI6 653 aaPredicted RBP13.72□□□□□ -0.21
USP48-210ENST00000489108 CCL17Q92583 94 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 TMIGD2Q96BF3 282 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 B3GAT2Q9NPZ5 323 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 SLC17A7Q9P2U7 560 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 BTNL2Q9UIR0 455 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 AUP1Q9Y679 476 aa13.72□□□□□ -0.21
USP48-210ENST00000489108 PPIAL4EA0A075B759 164 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 PPIAL4CA0A0B4J2A2 164 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 ISPDA4D126 451 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 PPIAL4DF5H284 164 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 CLDN34H7C241 214 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 OR2T1O43869 369 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 LCKP06239 509 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 PPIAL4FP0DN26 164 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 MAKP20794 623 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 PCGF2P35227 344 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 CDKN2CP42773 168 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 TXNL4AP83876 142 aaKnown RBP13.71□□□□□ -0.21
USP48-210ENST00000489108 RBBP4Q09028 425 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 CAMK2DQ13557 499 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 FAM69AQ5T7M9 428 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 NHLRC1Q6VVB1 395 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 MIER2Q8N344 545 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 OR6N1Q8NGY5 312 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 ZNF519Q8TB69 540 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 ST7LQ8TDW4 575 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 EPS8L3Q8TE67 593 aaKnown RBP13.71□□□□□ -0.21
USP48-210ENST00000489108 C11orf40Q8WZ69 217 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 PANX1Q96RD7 426 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 ULBP2Q9BZM5 246 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 SAP30LQ9HAJ7 183 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 FBXL3Q9UKT7 428 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 ZNF232Q9UNY5 417 aa13.71□□□□□ -0.21
USP48-210ENST00000489108 SOX21Q9Y651 276 aaPredicted RBP13.71□□□□□ -0.21
USP48-210ENST00000489108 TRAPPC2LH3BP13 241 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms