RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 IFI30P13284 250 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 CAPZA2P47755 286 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 RPS4XP62701 263 aaKnown RBP12.5□□□□□ -0.41
BRCA1-218ENST00000489037 SLC25A3Q00325 362 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 LINGO2Q7L985 606 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 SLC46A3Q7Z3Q1 461 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 TGIF2LYQ8IUE0 185 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 DEFB107AQ8IZN7 70 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 RNF113BQ8IZP6 322 aaKnown RBP12.5□□□□□ -0.41
BRCA1-218ENST00000489037 OR6X1Q8NH79 312 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 SMAP2Q8WU79 429 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-218ENST00000489037 ZNF566Q969W8 418 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 GTPBP3Q969Y2 492 aaKnown RBP12.5□□□□□ -0.41
BRCA1-218ENST00000489037 NSL1Q96IY1 281 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 GORASP2Q9H8Y8 452 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 STX18Q9P2W9 335 aaKnown RBP12.5□□□□□ -0.41
BRCA1-218ENST00000489037 RHCGQ9UBD6 479 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 LAMP3Q9UQV4 416 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 ATP23Q9Y6H3 246 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 AKAP9Q99996 3911 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 ARPC4-TTLL3A0A0A6YYG9 625 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 ZNF99A8MXY4 864 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-218ENST00000489037 SHISA9B4DS77 424 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 ENTPD5O75356 428 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 SAGP10523 405 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-218ENST00000489037 HSD17B1P14061 328 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 CD99P14209 185 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 ITGA2P17301 1181 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 SPATS1Q496A3 300 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 ZNF730Q6ZMV8 503 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 LILRB1Q8NHL6 650 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-218ENST00000489037 ACOT11Q8WXI4 607 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-218ENST00000489037 NEUROG1Q92886 237 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 BPIFA2Q96DR5 249 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 TRMT61AQ96FX7 289 aaKnown RBP12.49□□□□□ -0.41
BRCA1-218ENST00000489037 PERPQ96FX8 193 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 SLC25A44Q96H78 314 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-218ENST00000489037 INIPQ9NRY2 104 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 C20orf141Q9NUB4 165 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 DCAF13Q9NV06 445 aaKnown RBP12.49□□□□□ -0.41
BRCA1-218ENST00000489037 SNX13Q9Y5W8 968 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 ENPP4Q9Y6X5 453 aa12.49□□□□□ -0.41
BRCA1-218ENST00000489037 B2RBV5 119 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 J3KTA2 159 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 IGHG1P01857 330 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 CRYAAP02489 173 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 F13BP05160 661 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 DAP3P51398 398 aaKnown RBP12.48□□□□□ -0.41
BRCA1-218ENST00000489037 CLRN1P58418 232 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 ADAM8P78325 824 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 RPL18Q07020 188 aaKnown RBP12.48□□□□□ -0.41
BRCA1-218ENST00000489037 MELKQ14680 651 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 PHYHD1Q5SRE7 291 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 AGAP6Q5VW22 663 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 NHLRC1Q6VVB1 395 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 ZNF813Q6ZN06 617 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 FBXL14Q8N1E6 418 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 FITM2Q8N6M3 262 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 LIPHQ8WWY8 451 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 NANOS1Q8WY41 292 aaKnown RBP12.48□□□□□ -0.41
BRCA1-218ENST00000489037 MCUR1Q96AQ8 359 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 NSMCE2Q96MF7 247 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 SLC38A2Q96QD8 506 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 GSX2Q9BZM3 304 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 NDEL1Q9GZM8 345 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 ANKRD19PQ9H560 264 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 KRCC1Q9NPI7 259 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-218ENST00000489037 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 ADAM21Q9UKJ8 722 aa12.48□□□□□ -0.41
BRCA1-218ENST00000489037 EFCAB9A8MZ26 197 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 PIP5K1CO60331 668 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 H1F0P07305 194 aaKnown RBP12.47□□□□□ -0.41
BRCA1-218ENST00000489037 RHCEP18577 417 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 CALB2P22676 271 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 ARR3P36575 388 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 AQP2P41181 271 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 PTH2RP49190 550 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 FABP6P51161 128 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 SMIM11AP58511 58 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 TUBA1BP68363 451 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 TUBA4AP68366 448 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 PRKCDQ05655 676 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 TAF11Q15544 211 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 C3orf36Q3SXR2 165 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 ANKDD1AQ495B1 522 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 Q5PR19 223 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 PRSS57Q6UWY2 283 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 TUBA1AQ71U36 451 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 NRMQ8IXM6 262 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 FAM169BQ8N8A8 192 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 TMEM54Q969K7 222 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 PYURFQ96I23 114 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 FOXB1Q99853 325 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 DHRS9Q9BPW9 319 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 CD300AQ9UGN4 299 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 TMEM5Q9Y2B1 443 aa12.47□□□□□ -0.41
BRCA1-218ENST00000489037 TEP1Q99973 2627 aaKnown RBP12.46□□□□□ -0.41
BRCA1-218ENST00000489037 VSTM5A8MXK1 200 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 CENPBD1B2RD01 187 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms