RNA–Protein interactions for RNA: ENST00000488883.5

SFI1-225, Transcript of SFI1 centrin binding protein, human

TSL 3

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-225	ENST00000488883	SMARCD3	Q6STE5	483 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	KLHL17	Q6TDP4	642 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	HIPK1	Q86Z02	1210 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	PQLC1	Q8N2U9	271 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	CLDN22	Q8N7P3	220 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	ZNF519	Q8TB69	540 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	RNASE6	Q93091	150 aa	Known RBP	13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	TSPAN32	Q96QS1	320 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	KATNB1	Q9BVA0	655 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	RBM24	Q9BX46	236 aa	Known RBP	13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	MRPL13	Q9BYD1	178 aa	Known RBP	13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	PLA2G12A	Q9BZM1	189 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	GABARAPL1	Q9H0R8	117 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	EGLN3	Q9H6Z9	239 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	SMURF2	Q9HAU4	748 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	NRIP3	Q9NQ35	241 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	GALNT8	Q9NY28	637 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	IL20	Q9NYY1	176 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	OAZ3	Q9UMX2	235 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	ADAM18	Q9Y3Q7	739 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	CDH10	Q9Y6N8	788 aa		13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	TEP1	Q99973	2627 aa	Known RBP	13.55	□□□□□ -0.24
SFI1-225	ENST00000488883	ALPK2	Q86TB3	2170 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883		A0A1W2PRG6	482 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	SAC3D1	A6NKF1	404 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883		G3V2T6	193 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	TRMU	O75648	421 aa	Known RBP	13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	CNOT4	O95628	575 aa	Known RBP	13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	ANXA8	P13928	327 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	GSTM3	P21266	225 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	RPL27	P61353	136 aa	Known RBP	13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	STAC2	Q6ZMT1	411 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	DPY19L2P2	Q6ZN68	376 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883		Q6ZT83	130 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	BEND4	Q6ZU67	534 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	STK32C	Q86UX6	486 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	SVOPL	Q8N434	492 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	ACBD4	Q8NC06	268 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	FANK1	Q8TC84	345 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	HDAC2	Q92769	488 aa	Known RBP	13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	TMEM54	Q969K7	222 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	NMD3	Q96D46	503 aa	Known RBP	13.54	□□□□□ -0.24
SFI1-225	ENST00000488883		Q96M85	177 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	LINC00470	Q9BZP3	86 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	SLCO5A1	Q9H2Y9	848 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	MALT1	Q9UDY8	824 aa		13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	INTS1	Q8N201	2190 aa	Known RBP	13.54	□□□□□ -0.24
SFI1-225	ENST00000488883	ZNF726	A6NNF4	738 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	RRP9	O43818	475 aa	Known RBP	13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	SLC43A1	O75387	559 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	TXNDC12	O95881	172 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	PGA4	P0DJD7	388 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	PGA3	P0DJD8	388 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ZNF23	P17027	643 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	IGFBP2	P18065	325 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	IGHV1-2	P23083	117 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	CCKAR	P32238	428 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	CD79B	P40259	229 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ARHGDIA	P52565	204 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	TOP3A	Q13472	1001 aa	Predicted RBP	13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	TAF11	Q15544	211 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	HIST3H3	Q16695	136 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	CARD17	Q5XLA6	110 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	LRFN4	Q6PJG9	635 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ZDHHC13	Q8IUH4	622 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ARIH2OS	Q8N7S6	290 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	POMGNT2	Q8NAT1	580 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ICA1L	Q8NDH6	482 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ZNF837	Q96EG3	531 aa	Predicted RBP	13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	SLC25A44	Q96H78	314 aa	Predicted RBP	13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	LRR1	Q96L50	414 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ADAD1	Q96M93	576 aa	Known RBP	13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	POLDIP3	Q9BY77	421 aa	Known RBP	13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ELOVL5	Q9NYP7	299 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	IER3IP1	Q9Y5U9	82 aa		13.53	□□□□□ -0.24
SFI1-225	ENST00000488883	ADGRG4	Q8IZF6	3080 aa		13.52	□□□□□ -0.24
SFI1-225	ENST00000488883		A1L4Q6	167 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	OR6C65	A6NJZ3	312 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	ARPC3	O15145	178 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	AKAP8	O43823	692 aa	Known RBP	13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	MITF	O75030	526 aa	Predicted RBP	13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	SOX14	O95416	240 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	PPP1R3D	O95685	299 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	BAG2	O95816	211 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	ITGA5	P08648	1049 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	APEH	P13798	732 aa	Known RBP	13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	ACADS	P16219	412 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	COX5A	P20674	150 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	SLC6A6	P31641	620 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	RPL4	P36578	427 aa	Known RBP	13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	ACVR1B	P36896	505 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	DAP3	P51398	398 aa	Known RBP	13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	PPP2R2B	Q00005	443 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	FAP	Q12884	760 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	TSC22D1	Q15714	1073 aa		13.52	□□□□□ -0.25
SFI1-225	ENST00000488883	KDM4D	Q6B0I6	523 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms