RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 GLYR1Q49A26 553 aaPredicted RBP11.42□□□□□ -0.58
NELFE-209ENST00000488426 LEG1Q6P5S2 330 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 H1FNTQ75WM6 255 aaPredicted RBP11.42□□□□□ -0.58
NELFE-209ENST00000488426 SHFQ7M4L6 423 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ADCK1Q86TW2 530 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ZNF227Q86WZ6 799 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ACBD7Q8N6N7 88 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ZBTB8BQ8NAP8 495 aaPredicted RBP11.42□□□□□ -0.58
NELFE-209ENST00000488426 POMGNT2Q8NAT1 580 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 SNX18Q96RF0 628 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 CHST11Q9NPF2 352 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ANKRD10Q9NXR5 420 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 DKKL1Q9UK85 242 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 HDGFL3Q9Y3E1 203 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 OR6C68A6NDL8 312 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 H3BML4 177 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 CCRL2O00421 344 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 SLC22A1O15245 554 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 SBK2P0C263 348 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 HSMCR30P0CW71 290 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 CLUP10909 449 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 IL11P20809 199 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 PCSK6P29122 969 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 CDKN2AP42771 156 aaKnown RBP11.42□□□□□ -0.58
NELFE-209ENST00000488426 RPL27P61353 136 aaKnown RBP11.42□□□□□ -0.58
NELFE-209ENST00000488426 ACTC1P68032 377 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ACTA1P68133 377 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 PUDPQ08623 228 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 MYBPHQ13203 477 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 PON3Q15166 354 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 OR7A5Q15622 319 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 PAQR6Q6TCH4 344 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ARIH2OSQ8N7S6 290 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ADPRHL1Q8NDY3 354 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ATP6V1C2Q8NEY4 427 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 OR9Q1Q8NGQ5 310 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 OR52N1Q8NH53 320 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 DNAJA3Q96EY1 480 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 JSRP1Q96MG2 331 aaPredicted RBP11.42□□□□□ -0.58
NELFE-209ENST00000488426 GNRHR2Q96P88 292 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 OPALINQ96PE5 141 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 UTP23Q9BRU9 249 aaKnown RBP11.42□□□□□ -0.58
NELFE-209ENST00000488426 TXNIPQ9H3M7 391 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 FANCFQ9NPI8 374 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ERVK13-1Q9NX77 482 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 LRFN1Q9P244 771 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 SEC14L4Q9UDX3 406 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 ZNF346Q9UL40 294 aaKnown RBP11.42□□□□□ -0.58
NELFE-209ENST00000488426 B3GALT5Q9Y2C3 310 aa11.42□□□□□ -0.58
NELFE-209ENST00000488426 NBPF19A0A087WUL8 3843 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 A0A1W2PRG6 482 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 C11orf98E9PRG8 122 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 G3V3Y1 287 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 CEACAM4O75871 244 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 RENP00797 406 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 SPI1P17947 270 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 CNR1P21554 472 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 SRD5A2P31213 254 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 DNASE1L1P49184 302 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 DIO1P49895 249 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 SOX8P57073 446 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 TSTQ16762 297 aaKnown RBP11.41□□□□□ -0.58
NELFE-209ENST00000488426 TIMM50Q3ZCQ8 353 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 MESTQ5EB52 335 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 TUBA3EQ6PEY2 450 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 KLHL36Q8N4N3 616 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 ZNF519Q8TB69 540 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 ZNF649Q9BS31 505 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 ADGRL4Q9HBW9 690 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 LUZP4Q9P127 313 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 MOKQ9UQ07 419 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 CAB39Q9Y376 341 aaPredicted RBP11.41□□□□□ -0.58
NELFE-209ENST00000488426 MRPS18CQ9Y3D5 142 aaKnown RBP11.41□□□□□ -0.58
NELFE-209ENST00000488426 DOPEY2Q9Y3R5 2298 aa11.41□□□□□ -0.58
NELFE-209ENST00000488426 A0A1W2PNV4 684 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 C12orf71A8MTZ7 269 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 XKRYO14609 159 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 ZIC3O60481 467 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 SERPINI2O75830 405 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 GLCEO94923 617 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 GYPBP06028 91 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 AHCYP23526 432 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 CD96P40200 585 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 CD97P48960 835 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 ACKR1Q16570 336 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 B3GLCTQ6Y288 498 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 LHFPL3Q86UP9 236 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 ZNF485Q8NCK3 441 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 CNN2Q99439 309 aaKnown RBP11.4□□□□□ -0.58
NELFE-209ENST00000488426 PIGQQ9BRB3 760 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 ASB6Q9NWX5 421 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 BOKQ9UMX3 212 aaPredicted RBP11.4□□□□□ -0.58
NELFE-209ENST00000488426 TRAPPC4Q9Y296 219 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 PCDHGB7Q9Y5F8 929 aa11.4□□□□□ -0.58
NELFE-209ENST00000488426 A0A0G2JMM0 328 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 A0A1W2PPB8 328 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 A0A1W2PPW3 197 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 A0A1W2PRS3 328 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 DAPL1A0PJW8 107 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 LRRC3CA6NJW4 275 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms