RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 ZIK1Q3SY52 487 aaPredicted RBP17.9■□□□□ 0.46
TRIM8-204ENST00000487927 RBM48Q5RL73 367 aaKnown RBP17.9■□□□□ 0.46
TRIM8-204ENST00000487927 ZNF691Q5VV52 312 aa17.9■□□□□ 0.46
TRIM8-204ENST00000487927 BHLHA15Q7RTS1 189 aaPredicted RBP17.9■□□□□ 0.46
TRIM8-204ENST00000487927 VRK2Q86Y07 508 aa17.9■□□□□ 0.46
TRIM8-204ENST00000487927 OR6T1Q8NGN1 323 aa17.9■□□□□ 0.46
TRIM8-204ENST00000487927 SLC25A43Q8WUT9 341 aaPredicted RBP17.9■□□□□ 0.46
TRIM8-204ENST00000487927 HSD17B8Q92506 261 aa17.9■□□□□ 0.46
TRIM8-204ENST00000487927 FEVQ99581 238 aa17.9■□□□□ 0.46
TRIM8-204ENST00000487927 PITX2Q99697 317 aa17.9■□□□□ 0.46
TRIM8-204ENST00000487927 POTEKPQ9BYX7 375 aa17.9■□□□□ 0.46
TRIM8-204ENST00000487927 RNF115Q9Y4L5 304 aa17.9■□□□□ 0.46
TRIM8-204ENST00000487927 J3KTA2 159 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 M0R3H8 397 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 SULT2B1O00204 365 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 FFAR1O14842 300 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 SMAD7O15105 426 aaKnown RBP17.89■□□□□ 0.45
TRIM8-204ENST00000487927 LYZL6O75951 148 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 CBLP22681 906 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 APOBEC1P41238 236 aaKnown RBP17.89■□□□□ 0.45
TRIM8-204ENST00000487927 TUBA4AP68366 448 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 NPRL3Q12980 569 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 ZNF836Q6ZNA1 936 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 OR4D11Q8NGI4 311 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 ZNF563Q8TA94 476 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 CNOT9Q92600 299 aaKnown RBP17.89■□□□□ 0.45
TRIM8-204ENST00000487927 NEUROG1Q92886 237 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 DNAJA3Q96EY1 480 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 ARL5BQ96KC2 179 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 RSPO3Q9BXY4 272 aaPredicted RBP17.89■□□□□ 0.45
TRIM8-204ENST00000487927 DGCR6LQ9BY27 220 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 EXOSC3Q9NQT5 275 aaKnown RBP17.89■□□□□ 0.45
TRIM8-204ENST00000487927 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.89■□□□□ 0.45
TRIM8-204ENST00000487927 TESQ9UGI8 421 aaKnown RBP17.89■□□□□ 0.45
TRIM8-204ENST00000487927 CHRNA9Q9UGM1 479 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 BLOC1S6Q9UL45 172 aa17.89■□□□□ 0.45
TRIM8-204ENST00000487927 ZNF716A6NP11 495 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 FAM171A2A8MVW0 826 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 E9PQ18 207 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 TMCC2O75069 709 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 GNAO1P09471 354 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 TFPIP10646 304 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 IGHV1-2P23083 117 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 YAP1P46937 504 aaKnown RBP17.88■□□□□ 0.45
TRIM8-204ENST00000487927 UGT2B15P54855 530 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 TAS2R41P59536 307 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 ESRRGP62508 458 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 CSNK2A1P68400 391 aaPredicted RBP17.88■□□□□ 0.45
TRIM8-204ENST00000487927 COX10Q12887 443 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 TRAM2Q15035 370 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 FGD3Q5JSP0 725 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 GRINAQ7Z429 371 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 TSPYL5Q86VY4 417 aaPredicted RBP17.88■□□□□ 0.45
TRIM8-204ENST00000487927 ADGRG3Q86Y34 549 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 HDAC2Q92769 488 aaKnown RBP17.88■□□□□ 0.45
TRIM8-204ENST00000487927 SLC38A4Q969I6 547 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 FUZQ9BT04 418 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 CXorf56Q9H5V9 222 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 NDRG4Q9ULP0 352 aaKnown RBP17.88■□□□□ 0.45
TRIM8-204ENST00000487927 LAMP3Q9UQV4 416 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 PLCE1Q9P212 2302 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 JMJD1CQ15652 2540 aa17.88■□□□□ 0.45
TRIM8-204ENST00000487927 IGKV3D-15A0A087WSY6 115 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 SH3PXD2BA1X283 911 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 CDHR4A6H8M9 788 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 DPRXA6NFQ7 191 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 CNOT4O95628 575 aaKnown RBP17.87■□□□□ 0.45
TRIM8-204ENST00000487927 CD3EP07766 207 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 DANCRP0C864 163 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 COX5AP20674 150 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 GTF2A1P52655 376 aaPredicted RBP17.87■□□□□ 0.45
TRIM8-204ENST00000487927 TEKQ02763 1124 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 BSPH1Q075Z2 132 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 ZNF770Q6IQ21 691 aaPredicted RBP17.87■□□□□ 0.45
TRIM8-204ENST00000487927 CD300LDQ6UXZ3 194 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 GALNT5Q7Z7M9 940 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 OR52J3Q8NH60 311 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 HRASLS5Q96KN8 279 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 MUS81Q96NY9 551 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 USB1Q9BQ65 265 aaKnown RBP17.87■□□□□ 0.45
TRIM8-204ENST00000487927 OR11A1Q9GZK7 315 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 RIBC2Q9H4K1 309 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 ESRP2Q9H6T0 727 aaKnown RBP17.87■□□□□ 0.45
TRIM8-204ENST00000487927 NGBQ9NPG2 151 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 KRCC1Q9NPI7 259 aaPredicted RBP17.87■□□□□ 0.45
TRIM8-204ENST00000487927 NDUFA13Q9P0J0 144 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 GMPPBQ9Y5P6 360 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 SPIN1Q9Y657 262 aaPredicted RBP17.87■□□□□ 0.45
TRIM8-204ENST00000487927 HIVEP2P31629 2446 aa17.87■□□□□ 0.45
TRIM8-204ENST00000487927 A0A087WXM4 84 aa17.86■□□□□ 0.45
TRIM8-204ENST00000487927 OVOL3O00110 214 aa17.86■□□□□ 0.45
TRIM8-204ENST00000487927 RAMP1O60894 148 aa17.86■□□□□ 0.45
TRIM8-204ENST00000487927 PMS2P2O95744 297 aa17.86■□□□□ 0.45
TRIM8-204ENST00000487927 SOD3P08294 240 aa17.86■□□□□ 0.45
TRIM8-204ENST00000487927 GSTM3P21266 225 aa17.86■□□□□ 0.45
TRIM8-204ENST00000487927 NTF4P34130 210 aa17.86■□□□□ 0.45
TRIM8-204ENST00000487927 IDH2P48735 452 aaKnown RBP17.86■□□□□ 0.45
TRIM8-204ENST00000487927 CXCR4P61073 352 aa17.86■□□□□ 0.45
TRIM8-204ENST00000487927 RPS4XP62701 263 aaKnown RBP17.86■□□□□ 0.45
TRIM8-204ENST00000487927 APOFQ13790 326 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms