RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ZNF442Q9H7R0 627 aa20.46■□□□□ 0.87
PLOD3-215ENST00000487563 MYOZ1Q9NP98 299 aaPredicted RBP20.46■□□□□ 0.87
PLOD3-215ENST00000487563 DNHD1Q96M86 4753 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 hCG_2039718K7EN88 272 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 HLA-HP01893 362 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 ERCC1P07992 297 aaPredicted RBP20.45■□□□□ 0.86
PLOD3-215ENST00000487563 NPR2P20594 1047 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 THBS4P35443 961 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 CSNK1A1P48729 337 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 PPOXP50336 477 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 SNTB2Q13425 540 aaKnown RBP20.45■□□□□ 0.86
PLOD3-215ENST00000487563 NPTX1Q15818 432 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 GSG1Q2KHT4 349 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 METTL21CQ5VZV1 264 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 CYB5R2Q6BCY4 276 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 SPATA21Q7Z572 469 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 ADAMTS16Q8TE57 1224 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 KCNK17Q96T54 332 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 RAB1BQ9H0U4 201 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 SLC7A7Q9UM01 511 aa20.45■□□□□ 0.86
PLOD3-215ENST00000487563 TRAPPC13A5PLN9 417 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 KPNA4O00629 521 aaPredicted RBP20.44■□□□□ 0.86
PLOD3-215ENST00000487563 B4GALT1P15291 398 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 ZNF16P17020 682 aaPredicted RBP20.44■□□□□ 0.86
PLOD3-215ENST00000487563 CD247P20963 164 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 BIDP55957 195 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 LSM11P83369 360 aaKnown RBP eCLIP20.44■□□□□ 0.86
PLOD3-215ENST00000487563 CYLC2Q14093 348 aaPredicted RBP20.44■□□□□ 0.86
PLOD3-215ENST00000487563 DAG1Q14118 895 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 TRMT5Q32P41 509 aaKnown RBP20.44■□□□□ 0.86
PLOD3-215ENST00000487563 PODNL1Q6PEZ8 512 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 RBM45Q8IUH3 476 aaKnown RBP20.44■□□□□ 0.86
PLOD3-215ENST00000487563 SVOPLQ8N434 492 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 RASSF5Q8WWW0 418 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 TAMM41Q96BW9 452 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 TMEM120AQ9BXJ8 343 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 DYNLRB1Q9NP97 96 aa20.44■□□□□ 0.86
PLOD3-215ENST00000487563 LOC390937A0A1W2PQ73 354 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 CH25HO95992 272 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 UMPSP11172 480 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 IFNGR1P15260 489 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 H2AFXP16104 143 aaPredicted RBP20.43■□□□□ 0.86
PLOD3-215ENST00000487563 NR4A2P43354 598 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 PIGFQ07326 219 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 ZNF74Q16587 644 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 VMACQ2NL98 169 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 KRT80Q6KB66 452 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 LINC00114Q6XXX2 140 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 WDR88Q6ZMY6 472 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 CXXC5Q7LFL8 322 aaKnown RBP20.43■□□□□ 0.86
PLOD3-215ENST00000487563 OR4D11Q8NGI4 311 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 FOXB1Q99853 325 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 NOX3Q9HBY0 568 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 NANSQ9NR45 359 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 CDC42EP3Q9UKI2 254 aa20.43■□□□□ 0.86
PLOD3-215ENST00000487563 RNF13O43567 381 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 RAB36O95755 333 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 HIST1H2ABP04908 130 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 IGHV4-31P0DP07 118 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 TROVE2P10155 538 aaKnown RBP eCLIP20.42■□□□□ 0.86
PLOD3-215ENST00000487563 GZMKP49863 264 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 MMEL1Q495T6 779 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 IQCCQ4KMZ1 466 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 SLC35D2Q76EJ3 337 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 HIST3H2AQ7L7L0 130 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 HIST1H2ACQ93077 130 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 MPP4Q96JB8 637 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 SH3GL1Q99961 368 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 B3GNT2Q9NY97 397 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 SPEF1Q9Y4P9 236 aa20.42■□□□□ 0.86
PLOD3-215ENST00000487563 SH3PXD2BA1X283 911 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 VWC2LB2RUY7 222 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 APEHP13798 732 aaKnown RBP20.41■□□□□ 0.86
PLOD3-215ENST00000487563 PTDSS1P48651 473 aaKnown RBP20.41■□□□□ 0.86
PLOD3-215ENST00000487563 NANOGP8Q6NSW7 305 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 NHLRC1Q6VVB1 395 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 ZNF627Q7L945 461 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 WDFY1Q8IWB7 410 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 MS4A3Q96HJ5 214 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 FOXN4Q96NZ1 517 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 ECSITQ9BQ95 431 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 SLC19A3Q9BZV2 496 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 NANOGQ9H9S0 305 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 MRGBPQ9NV56 204 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 CMAHPQ9Y471 501 aa20.41■□□□□ 0.86
PLOD3-215ENST00000487563 FBP2O00757 339 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 UBL3O95164 117 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 LYPD3O95274 346 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 THY1P04216 161 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 RABL3Q5HYI8 236 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 NANOGNBQ7Z5D8 188 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 ZNF540Q8NDQ6 660 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 OR6X1Q8NH79 312 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 NEU4Q8WWR8 484 aaPredicted RBP20.4■□□□□ 0.86
PLOD3-215ENST00000487563 BEX2Q9BXY8 128 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 PCDHAC1Q9H158 963 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 ZNF229Q9UJW7 825 aa20.4■□□□□ 0.86
PLOD3-215ENST00000487563 ATRQ13535 2644 aa20.39■□□□□ 0.85
PLOD3-215ENST00000487563 ENTPD5O75356 428 aa20.39■□□□□ 0.85
PLOD3-215ENST00000487563 FAM157CP0CG43 387 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms