RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 LRR1Q96L50 414 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF416Q9BWM5 594 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 WDR55Q9H6Y2 383 aaPredicted RBP16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 G6PC2Q9NQR9 355 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 THUMPD1Q9NXG2 353 aaKnown RBP16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 DUSP13Q9UII6 198 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 POFUT2Q9Y2G5 429 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 A0A1B0GWA3 101 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 A0A1W2PPW3 197 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 TMEM247A6NEH6 219 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 TRPC5OSA6NMA1 111 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 RAB36O95755 333 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 NUDT7P0C024 238 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 NQO1P15559 274 aaKnown RBP16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 HTR2AP28223 471 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 EPHA3P29320 983 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 RAB1AP62820 205 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 MYBPC1Q00872 1141 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 LSMEM1Q8N8F7 131 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 MGARPQ8TDB4 240 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 SLC41A3Q96GZ6 507 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 TXNDC15Q96J42 360 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 PAIP2Q9BPZ3 127 aaKnown RBP16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 RSPO3Q9BXY4 272 aaPredicted RBP16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF385DQ9H6B1 395 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 BCL2L10Q9HD36 194 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 B3GAT2Q9NPZ5 323 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 MED29Q9NX70 200 aa16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 V9GYY5 206 aaPredicted RBP16.65■□□□□ 0.26
SMPDL3A-202ENST00000487215 A0A087WUJ7 227 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 MAGEB1P43366 347 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 BST1Q10588 318 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 ALKBH6Q3KRA9 238 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 TNFAIP8L3Q5GJ75 292 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 ALG10BQ5I7T1 473 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 NHLRC1Q6VVB1 395 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 TEX29Q8N6K0 151 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 MAL2Q969L2 176 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 JMJD8Q96S16 334 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 FOXB1Q99853 325 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 ULBP2Q9BZM5 246 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 DENND2DQ9H6A0 471 aaPredicted RBP16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 THAP1Q9NVV9 213 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 SLC7A8Q9UHI5 535 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 ZNF346Q9UL40 294 aaKnown RBP16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 CORINQ9Y5Q5 1042 aa16.64■□□□□ 0.25
SMPDL3A-202ENST00000487215 SLC22A3O75751 556 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 UBL3O95164 117 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 LIMS1P48059 325 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 CAMK2DQ13557 499 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 MPP2Q14168 576 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 RAB39AQ14964 217 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 GLIPR1L2Q4G1C9 344 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 PDCD4Q53EL6 469 aaKnown RBP16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 COMTD1Q86VU5 262 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 ZNF584Q8IVC4 421 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 OR6N1Q8NGY5 312 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 BBS10Q8TAM1 723 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 DNAJA4Q8WW22 397 aaPredicted RBP16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 ZNF665Q9H7R5 613 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 A4GALTQ9NPC4 353 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 RAB21Q9UL25 225 aa16.63■□□□□ 0.25
SMPDL3A-202ENST00000487215 MGAM2Q2M2H8 2515 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 HDAC3O15379 428 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 CDC14BO60729 498 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 MPZL1O95297 269 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 BGLAPP02818 100 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 PATE4P0C8F1 98 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 IDO1P14902 403 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 ANPEPP15144 967 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 PRKAR1BP31321 381 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 RGNQ15493 299 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 NKPD1Q17RQ9 610 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 AWAT1Q58HT5 328 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 C6orf10Q5SRN2 563 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 AVPI1Q5T686 147 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 ACSM5Q6NUN0 579 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 C1QL2Q7Z5L3 287 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 SNX32Q86XE0 403 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 SCAIQ8N9R8 606 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 OR6S1Q8NH40 331 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 ITCHQ96J02 903 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 ASPNQ9BXN1 380 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 TMPRSS13Q9BYE2 586 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 RMND5AQ9H871 391 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 SLC52A3Q9NQ40 469 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 FBXL3Q9UKT7 428 aa16.62■□□□□ 0.25
SMPDL3A-202ENST00000487215 PLPP2O43688 288 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 BMP2P12643 396 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 LSP1P33241 339 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 MVKQ03426 396 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 PUDPQ08623 228 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 RGS7BPQ6MZT1 257 aaPredicted RBP16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 ULK3Q6PHR2 472 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 MSANTD1Q6ZTZ1 278 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 SKA3Q8IX90 412 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 ANKRD42Q8N9B4 389 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 FGFBP3Q8TAT2 258 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 MOGAT1Q96PD6 335 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms