RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 P2RY6Q15077 328 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 CTU2Q2VPK5 515 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 VPS26BQ4G0F5 336 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 UNC50Q53HI1 259 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 TCHHL1Q5QJ38 904 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 SH2D4BQ5SQS7 431 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF678Q5SXM1 525 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 NCMAPQ5T1S8 102 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 PDSS1Q5T2R2 415 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 CPTPQ5TA50 214 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ATPAF1Q5TC12 328 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 LGSNQ5TDP6 509 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 DGAT2L7PQ6IED9 249 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 FAM71E1Q6IPT2 247 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 MFSD12Q6NUT3 480 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 APOOLQ6UXV4 268 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 GPRIN3Q6ZVF9 776 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 RPS27LQ71UM5 84 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 SSX8Q7RTT4 187 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 GALNT10Q86SR1 603 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 LCA5Q86VQ0 697 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 EPHX4Q8IUS5 362 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 GABRG1Q8N1C3 465 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 OR10D3Q8NH80 312 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 FAM76AQ8TAV0 307 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 RAB3IL1Q8TBN0 382 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 METTL6Q8TCB7 284 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 SMAP2Q8WU79 429 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 HSD17B8Q92506 261 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 OSTF1Q92882 214 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ELP4Q96EB1 424 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ZBED6CLQ96FA7 236 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 AMDHD1Q96NU7 426 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 UHRF2Q96PU4 802 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF382Q96SR6 550 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 HBEGFQ99075 208 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 LMF2Q9BU23 707 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ACPTQ9BZG2 426 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 TBL1XR1Q9BZK7 514 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 EGLN1Q9GZT9 426 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 TSPYL1Q9H0U9 437 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ESRP2Q9H6T0 727 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 PLEKHA2Q9HB19 425 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 LRTM1Q9HBL6 345 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 YAE1D1Q9NRH1 226 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ZFP57Q9NU63 452 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ZDHHC18Q9NUE0 388 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 FLRT3Q9NZU0 649 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 CLEC4AQ9UMR7 237 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 LIPT1Q9Y234 373 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 VDAC3Q9Y277 283 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 STK38LQ9Y2H1 464 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 RNF115Q9Y4L5 304 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 A0A0J9YW62 118 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 A0A1W2PP18 115 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 A0A1W2PQD3 144 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 A0A1W2PRB8 838 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 DPRXA6NFQ7 191 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 A8MV72 311 aaPredicted RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 HNRNPCL2B2RXH8 293 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TRIM49D1C9J1S8 452 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TNFSF11O14788 317 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 CLOCKO15516 846 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 NKX2-2O95096 273 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 OXSR1O95747 527 aaPredicted RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 HSPA4LO95757 839 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 IGKV1D-16P01601 117 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 CD8AP01732 235 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 IGHV4-39P01824 125 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 YES1P07947 543 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 SNRPAP09012 282 aaKnown RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 FAM157CP0CG43 387 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 PRPS2P11908 318 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 ME2P23368 584 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 IL32P24001 234 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 HMOX2P30519 316 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 AGTR1P30556 359 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 NTSP30990 170 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 ACVR1BP36896 505 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 CDKN1AP38936 164 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 EIF1P41567 113 aaKnown RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 RFX3P48380 749 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF41P51814 821 aaPredicted RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 PRKAA2P54646 552 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 CARD18P57730 90 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 LINC01547P58512 204 aaPredicted RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 NAA20P61599 178 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 BTKQ06187 659 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 LCP2Q13094 533 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 ITGADQ13349 1161 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 RNPS1Q15287 305 aaKnown RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 FCN2Q15485 313 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TAB1Q15750 504 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 NRF1Q16656 503 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 PGGHGQ32M88 737 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 PLPPR5Q32ZL2 321 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 GRAMD1BQ3KR37 738 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 CHRFAM7AQ494W8 412 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TEX35Q5T0J7 233 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 HBMQ6B0K9 141 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms