RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 SLC35F4A4IF30 521 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 CENPBD1B2RD01 187 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 M0R129 80 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 AKAP8O43823 692 aaKnown RBP8.49□□□□□ -1.05
MCF2L-227ENST00000486806 TNFSF13O75888 250 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 SLC2A10O95528 541 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 BCL10O95999 233 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 CRHP06850 196 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 YES1P07947 543 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 PGA4P0DJD7 388 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 PGA3P0DJD8 388 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 EDNRAP25101 427 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 SELENOPP49908 381 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 BIDP55957 195 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 CLDN17P56750 224 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 EFNB1P98172 346 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 MYBPC1Q00872 1141 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 C6orf52Q5T4I8 152 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 RIPPLY2Q5TAB7 128 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF691Q5VV52 312 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 TTC23Q5W5X9 447 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 PTCHD4Q6ZW05 846 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 FAM214BQ7L5A3 538 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 HDDC2Q7Z4H3 204 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 MCEMP1Q8IX19 187 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 GCNT2Q8N0V5 402 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 DHRSXQ8N5I4 330 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF555Q8NEP9 628 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 NOXO1Q8NFA2 376 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 CYGBQ8WWM9 190 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 HDAC2Q92769 488 aaKnown RBP8.49□□□□□ -1.05
MCF2L-227ENST00000486806 NMD3Q96D46 503 aaKnown RBP8.49□□□□□ -1.05
MCF2L-227ENST00000486806 SLC25A44Q96H78 314 aaPredicted RBP8.49□□□□□ -1.05
MCF2L-227ENST00000486806 SNX18Q96RF0 628 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 KCNK17Q96T54 332 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 DDOQ99489 341 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 EMC6Q9BV81 110 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 MRPL13Q9BYD1 178 aaKnown RBP8.49□□□□□ -1.05
MCF2L-227ENST00000486806 ANKRD60Q9BZ19 345 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 PRRG3Q9BZD7 231 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 VSX1Q9NZR4 365 aaPredicted RBP8.49□□□□□ -1.05
MCF2L-227ENST00000486806 GRHPRQ9UBQ7 328 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 FOXD3Q9UJU5 478 aaPredicted RBP8.49□□□□□ -1.05
MCF2L-227ENST00000486806 NOSIPQ9Y314 301 aaKnown RBP8.49□□□□□ -1.05
MCF2L-227ENST00000486806 MEMO1Q9Y316 297 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 GMPPBQ9Y5P6 360 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 MPDZO75970 2070 aa8.49□□□□□ -1.05
MCF2L-227ENST00000486806 DNAJC13O75165 2243 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 TRGV8A0A0C4DH27 118 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 PRSS37A4D1T9 235 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 A6NIZ1 184 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 PRKYO43930 277 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 TRMUO75648 421 aaKnown RBP8.48□□□□□ -1.05
MCF2L-227ENST00000486806 CLIC3O95833 236 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 IGHG1P01857 330 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 HMGN1P05114 100 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 GNAO1P09471 354 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 ACADSP16219 412 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 GABRB1P18505 474 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 NOS3P29474 1203 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 ACVR1BP36896 505 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 CDKN2AP42771 156 aaKnown RBP8.48□□□□□ -1.05
MCF2L-227ENST00000486806 KIR2DL2P43627 348 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-227ENST00000486806 UQCRFS1P47985 274 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 PCYT1AP49585 367 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF133P52736 654 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-227ENST00000486806 CASP6P55212 293 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 CDC42P60953 191 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 RAP1BP61224 184 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 RAP1AP62834 184 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.48□□□□□ -1.05
MCF2L-227ENST00000486806 FOXF2Q12947 444 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 IL18R1Q13478 541 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 CRMP1Q14194 572 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 HIST3H3Q16695 136 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 SLC35F1Q5T1Q4 408 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 NIPAL3Q6P499 406 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 CASP12Q6UXS9 341 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 TFAP2EQ6VUC0 442 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 NCCRP1Q6ZVX7 275 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-227ENST00000486806 NUFIP2Q7Z417 695 aaKnown RBP8.48□□□□□ -1.05
MCF2L-227ENST00000486806 ENTHD1Q8IYW4 607 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 SLC37A3Q8NCC5 494 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 NPEPL1Q8NDH3 523 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 SDR9C7Q8NEX9 313 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 OR6K3Q8NGY3 331 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 OR4K13Q8NH42 304 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 FAM81AQ8TBF8 368 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF566Q969W8 418 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-227ENST00000486806 INTS12Q96CB8 462 aaKnown RBP8.48□□□□□ -1.05
MCF2L-227ENST00000486806 SLC38A2Q96QD8 506 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 NMNAT3Q96T66 252 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 ALG12Q9BV10 488 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 SFXN3Q9BWM7 321 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 NMNAT2Q9BZQ4 307 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 FN3KQ9H479 309 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 ZNF226Q9NYT6 803 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 TVP23BQ9NYZ1 205 aa8.48□□□□□ -1.05
MCF2L-227ENST00000486806 SH3BGRL2Q9UJC5 107 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms