RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 B3GNT2Q9NY97 397 aa14.84□□□□□ -0.03
SMC4-216ENST00000485645 MRPL39Q9NYK5 338 aaKnown RBP14.84□□□□□ -0.03
SMC4-216ENST00000485645 LEF1Q9UJU2 399 aaPredicted RBP14.84□□□□□ -0.03
SMC4-216ENST00000485645 POFUT2Q9Y2G5 429 aa14.84□□□□□ -0.03
SMC4-216ENST00000485645 SH3PXD2BA1X283 911 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 LRRN3E7EW58 273 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 STAMBPO95630 424 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 HLA-HP01893 362 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 CD79AP11912 226 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 ZNF23P17027 643 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 AHCYP23526 432 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 IGFBP5P24593 272 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 SNTB2Q13425 540 aaKnown RBP14.83□□□□□ -0.04
SMC4-216ENST00000485645 CAMK2DQ13557 499 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 GSG1Q2KHT4 349 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 KRT80Q6KB66 452 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 ZNF813Q6ZN06 617 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 PXKQ7Z7A4 578 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 SMYD1Q8NB12 490 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 C11orf65Q8NCR3 313 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 OR6N1Q8NGY5 312 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 MCHR1Q99705 422 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 ULBP2Q9BZM5 246 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 NOX3Q9HBY0 568 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 DYNLRB1Q9NP97 96 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 CMAHPQ9Y471 501 aa14.83□□□□□ -0.04
SMC4-216ENST00000485645 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.82□□□□□ -0.041e-10■■■■□ 23.3
SMC4-216ENST00000485645 TMEM129A0AVI4 362 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 PLPP3O14495 311 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 FMO6PO60774 539 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 SERPINI2O75830 405 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 MT-ATP6P00846 226 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 DAOP14920 347 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 SRD5A1P18405 259 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 PCBP3P57721 371 aaKnown RBP14.82□□□□□ -0.04
SMC4-216ENST00000485645 RBBP4Q09028 425 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 CYP51A1Q16850 503 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 ZNF613Q6PF04 617 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 NHLRC1Q6VVB1 395 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 ZNF627Q7L945 461 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 DHDDSQ86SQ9 333 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 PTOV1Q86YD1 416 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 ZCCHC24Q8N2G6 241 aaKnown RBP14.82□□□□□ -0.04
SMC4-216ENST00000485645 OR5J2Q8NH18 312 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 NDUFAF1Q9Y375 327 aa14.82□□□□□ -0.04
SMC4-216ENST00000485645 M0QX08 132 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 M0R3H8 397 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 CHP2O43745 196 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 TGFAP01135 160 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 C8BP07358 591 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 ADORA3P0DMS8 318 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 HNF1AP20823 631 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 NR4A1P22736 598 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 GIFP27352 417 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 THBS2P35442 1172 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 PIGFQ07326 219 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 DUSP7Q16829 419 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 FAM120AOSQ5T036 256 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 LINC00114Q6XXX2 140 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 CDK20Q8IZL9 346 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 ARHGDIGQ99819 225 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 FOXB1Q99853 325 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 DENND2DQ9H6A0 471 aaPredicted RBP14.81□□□□□ -0.04
SMC4-216ENST00000485645 SPEF1Q9Y4P9 236 aa14.81□□□□□ -0.04
SMC4-216ENST00000485645 C11orf98E9PRG8 122 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 ANGPT2O15123 496 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 OR6A2O95222 327 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 OPN1SWP03999 348 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 ADRA2AP08913 450 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 B4GALT1P15291 398 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 ZNF14P17017 642 aaPredicted RBP14.8□□□□□ -0.04
SMC4-216ENST00000485645 PTDSS1P48651 473 aaKnown RBP14.8□□□□□ -0.04
SMC4-216ENST00000485645 CSNK1A1P48729 337 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 EVX1P49640 407 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 MTPNP58546 118 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 RAB1AP62820 205 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 TRMT5Q32P41 509 aaKnown RBP14.8□□□□□ -0.04
SMC4-216ENST00000485645 ENTPD8Q5MY95 495 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 IL17RELQ6ZVW7 336 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 WDFY1Q8IWB7 410 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 ZNF786Q8N393 782 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 DPP10Q8N608 796 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 OR6T1Q8NGN1 323 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 UBASH3BQ8TF42 649 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 STON2Q8WXE9 905 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 MS4A3Q96HJ5 214 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 ZNF75AQ96N20 296 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 CGREF1Q99674 301 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 TRIM33Q9UPN9 1127 aa14.8□□□□□ -0.04
SMC4-216ENST00000485645 LRP5LA4QPB2 252 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 CPSF4LA6NMK7 179 aaKnown RBP14.79□□□□□ -0.04
SMC4-216ENST00000485645 UBL3O95164 117 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 RAB36O95755 333 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 TACSTD2P09758 323 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 ZNF35P13682 527 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 IFNGR1P15260 489 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 GIPRP48546 466 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 CHN2P52757 468 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 BIDP55957 195 aa14.79□□□□□ -0.04
SMC4-216ENST00000485645 SELPLGQ14242 412 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms