RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 BEX4Q9NWD9 120 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-225ENST00000483506 HIF3AQ9Y2N7 669 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 DSCAMO60469 2012 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 A0A087WUU8 490 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 A0A1W2PR80 420 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF726A6NNF4 738 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 BLOC1S5-TXNDC5H3BN57 136 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 WNT11O96014 354 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 IFI30P13284 250 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 PTAFRP25105 342 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 BIDP55957 195 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 CAMK2DQ13557 499 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 CEACAM16Q2WEN9 425 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 DEFB113Q30KQ7 82 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 ANKDD1AQ495B1 522 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 TMEM108Q6UXF1 575 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF611Q8N823 705 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 SLC7A13Q8TCU3 470 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 TMEM54Q969K7 222 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF837Q96EG3 531 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-225ENST00000483506 SLC25A44Q96H78 314 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-225ENST00000483506 RADILQ96JH8 1075 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 SEPHS2Q99611 448 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 B3GAT2Q9NPZ5 323 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 ACTR3BQ9P1U1 418 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 ITGB1BP2Q9UKP3 347 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 PRPF19Q9UMS4 504 aaKnown RBP15.75■□□□□ 0.11
HDAC6-225ENST00000483506 MGAT4BQ9UQ53 548 aa15.75■□□□□ 0.11
HDAC6-225ENST00000483506 FAM32AQ9Y421 112 aaKnown RBP15.75■□□□□ 0.11
HDAC6-225ENST00000483506 MAP1AP78559 2803 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-225ENST00000483506 HIVEP1P15822 2718 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 ITPR3Q14573 2671 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF99A8MXY4 864 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-225ENST00000483506 CENPBD1B2RD01 187 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 SHISA9B4DS77 424 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 M0R3G1 203 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 TMCC2O75069 709 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 SERPINI2O75830 405 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 H1F0P07305 194 aaKnown RBP15.74■□□□□ 0.11
HDAC6-225ENST00000483506 ITGA2P17301 1181 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 CDH2P19022 906 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-225ENST00000483506 MAKP20794 623 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 CD40P25942 277 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 AQP2P41181 271 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 SLC9A3P48764 834 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 ART1P52961 327 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 ARF1P84077 181 aaKnown RBP15.74■□□□□ 0.11
HDAC6-225ENST00000483506 FHL1Q13642 323 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 C3orf36Q3SXR2 165 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF672Q499Z4 452 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-225ENST00000483506 MTX3Q5HYI7 312 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 CARD17Q5XLA6 110 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 KLHL24Q6TFL4 600 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF730Q6ZMV8 503 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 FAM169BQ8N8A8 192 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 AKAP1Q92667 903 aaKnown RBP eCLIP15.74■□□□□ 0.11
HDAC6-225ENST00000483506 PIGTQ969N2 578 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 FUZQ9BT04 418 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 MOV10Q9HCE1 1003 aaKnown RBP15.74■□□□□ 0.11
HDAC6-225ENST00000483506 INIPQ9NRY2 104 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 TAS2R1Q9NYW7 299 aa15.74■□□□□ 0.11
HDAC6-225ENST00000483506 CRNNQ9UBG3 495 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-225ENST00000483506 A0A1W2PRG6 482 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 hCG_2039718K7EN88 272 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 ABCD4O14678 606 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 CLOCKO15516 846 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 BCL10O95999 233 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 PGA4P0DJD7 388 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 PGA3P0DJD8 388 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 CSNK1A1P48729 337 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF83P51522 516 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 LCN8Q6JVE9 175 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 TMPRSS11FQ6ZWK6 438 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 HDDC2Q7Z4H3 204 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 CCDC36Q8IYA8 594 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 KBTBD8Q8NFY9 601 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 MOSPD2Q8NHP6 518 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 ASB10Q8WXI3 467 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF566Q969W8 418 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 IL1RAPQ9NPH3 570 aa15.73■□□□□ 0.11
HDAC6-225ENST00000483506 STX18Q9P2W9 335 aaKnown RBP15.73■□□□□ 0.11
HDAC6-225ENST00000483506 F8P00451 2351 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 IGHMP01871 453 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 F13BP05160 661 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 ATP6V1B2P21281 511 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 DAP3P51398 398 aaKnown RBP15.72■□□□□ 0.11
HDAC6-225ENST00000483506 FOXD4Q12950 439 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-225ENST00000483506 TRIM25Q14258 630 aaKnown RBP15.72■□□□□ 0.11
HDAC6-225ENST00000483506 MELKQ14680 651 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 TAF11Q15544 211 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 HIST3H3Q16695 136 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 ARMC4Q5T2S8 1044 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 PODNL1Q6PEZ8 512 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 TBPL2Q6SJ96 375 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 LRRC75AQ8NAA5 344 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 OR6N1Q8NGY5 312 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 CCL19Q99731 98 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 MRPL13Q9BYD1 178 aaKnown RBP15.72■□□□□ 0.11
HDAC6-225ENST00000483506 ULBP2Q9BZM5 246 aa15.72■□□□□ 0.11
HDAC6-225ENST00000483506 GLTPQ9NZD2 209 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms