RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 PCGF3Q3KNV8 242 aa13.06□□□□□ -0.32
COL9A2-207ENST00000482722 TRMT12Q53H54 448 aaKnown RBP13.06□□□□□ -0.32
COL9A2-207ENST00000482722 MFSD12Q6NUT3 480 aa13.06□□□□□ -0.32
COL9A2-207ENST00000482722 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.06□□□□□ -0.32
COL9A2-207ENST00000482722 ZNF546Q86UE3 836 aa13.06□□□□□ -0.32
COL9A2-207ENST00000482722 LRRC25Q8N386 305 aaPredicted RBP13.06□□□□□ -0.32
COL9A2-207ENST00000482722 OR52E2Q8NGJ4 325 aa13.06□□□□□ -0.32
COL9A2-207ENST00000482722 SNX33Q8WV41 574 aa13.06□□□□□ -0.32
COL9A2-207ENST00000482722 MRPL38Q96DV4 380 aaKnown RBP13.06□□□□□ -0.32
COL9A2-207ENST00000482722 MS4A4EQ96PG1 132 aa13.06□□□□□ -0.32
COL9A2-207ENST00000482722 CHST6Q9GZX3 395 aa13.06□□□□□ -0.32
COL9A2-207ENST00000482722 TMEM185BQ9H7F4 350 aa13.06□□□□□ -0.32
COL9A2-207ENST00000482722 MTHFD2LQ9H903 347 aaPredicted RBP13.06□□□□□ -0.32
COL9A2-207ENST00000482722 MEPEQ9NQ76 525 aaPredicted RBP13.06□□□□□ -0.32
COL9A2-207ENST00000482722 ZNF230Q9UIE0 474 aaPredicted RBP13.06□□□□□ -0.32
COL9A2-207ENST00000482722 SIGLEC7Q9Y286 467 aa13.06□□□□□ -0.32
COL9A2-207ENST00000482722 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-207ENST00000482722 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-207ENST00000482722 ADCYAP1P18509 176 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 RFC3P40938 356 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 CCDC157Q569K6 752 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 MANEAQ5SRI9 462 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 FIGNL1Q6PIW4 674 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 UNQ9370/PRO34162Q6UXP9 181 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 OR10G6Q8NH81 332 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 HAVCR1Q96D42 359 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 FGF22Q9HCT0 170 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 LRRC72A6NJI9 287 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 LDB3O75112 727 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 RCBTB2O95199 551 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 KLF8O95600 359 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-207ENST00000482722 SPP1P10451 314 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 NDUFS1P28331 727 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 MRPS10P82664 201 aaKnown RBP13.05□□□□□ -0.32
COL9A2-207ENST00000482722 PLA2G7Q13093 441 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 OR2W3Q7Z3T1 314 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 RANBP3LQ86VV4 465 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-207ENST00000482722 ZFP82Q8N141 532 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 OR1M1Q8NGA1 313 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 RAB11FIP5Q9BXF6 653 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 RSPH9Q9H1X1 276 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-207ENST00000482722 EDARQ9UNE0 448 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 V9GY05 133 aa13.05□□□□□ -0.32
COL9A2-207ENST00000482722 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
COL9A2-207ENST00000482722 TMEM218A2RU14 115 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 ZNF3P17036 446 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 CD96P40200 585 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 CAPZA2P47755 286 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 NDUFAF6Q330K2 333 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 C4orf46Q504U0 113 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 SLC6A19Q695T7 634 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 RPL22L1Q6P5R6 122 aaKnown RBP13.04□□□□□ -0.32
COL9A2-207ENST00000482722 VN1R4Q7Z5H5 301 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 SVBPQ8N300 66 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 NANPQ8TBE9 248 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 DUSP19Q8WTR2 217 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 ZNRF4Q8WWF5 429 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 IL21RQ9HBE5 538 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 HAO2Q9NYQ3 351 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 TBC1D29Q9UFV1 150 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 KCNE5Q9UJ90 142 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 OR6C68A6NDL8 312 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 FAM171A2A8MVW0 826 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 ITPKBP27987 946 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 LTBRP36941 435 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 ARFIP1P53367 373 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 MPPED2Q15777 294 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 MICBQ29980 383 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 GXYLT1Q4G148 440 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 ZNF542PQ5EBM4 170 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 BEX5Q5H9J7 111 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 GLB1L2Q8IW92 636 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 CDK20Q8IZL9 346 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 MFSD9Q8NBP5 474 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 OR1S2Q8NGQ3 325 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 SFT2D1Q8WV19 159 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 TSACCQ96A04 125 aaPredicted RBP13.04□□□□□ -0.32
COL9A2-207ENST00000482722 SDF2Q99470 211 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 TRPV4Q9HBA0 871 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 PCDHB10Q9UN67 800 aa13.04□□□□□ -0.32
COL9A2-207ENST00000482722 ARID1BQ8NFD5 2236 aaPredicted RBP13.04□□□□□ -0.32
COL9A2-207ENST00000482722 TRAV20A0A0B4J274 112 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 DUXAA6NLW8 204 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 EIF3GO75821 320 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL9A2-207ENST00000482722 RAB40ALP0C0E4 278 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 RORAP35398 523 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 IGFALSP35858 605 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 PPIAP62937 165 aaKnown RBP13.03□□□□□ -0.32
COL9A2-207ENST00000482722 EEF1A1P68104 462 aaKnown RBP13.03□□□□□ -0.32
COL9A2-207ENST00000482722 SWI5Q1ZZU3 235 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 HYAL4Q2M3T9 481 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 JMJD6Q6NYC1 403 aaPredicted RBP13.03□□□□□ -0.32
COL9A2-207ENST00000482722 C12orf45Q8N5I9 185 aaPredicted RBP13.03□□□□□ -0.32
COL9A2-207ENST00000482722 OR14A16Q8NHC5 309 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 SLC2A12Q8TD20 617 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 RAB40AQ8WXH6 277 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 PTCHD1Q96NR3 888 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 SLC17A9Q9BYT1 436 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 PIGMQ9H3S5 423 aa13.03□□□□□ -0.32
COL9A2-207ENST00000482722 C2orf42Q9NWW7 574 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms