RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 KLF4O43474 513 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 HOXC12P31275 282 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 MAGEA2P43356 314 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 GPR4P46093 362 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 DAP3P51398 398 aaKnown RBP18.37■□□□□ 0.53
SEC13-217ENST00000482647 NR1H2P55055 460 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 RPS4XP62701 263 aaKnown RBP18.37■□□□□ 0.53
SEC13-217ENST00000482647 SEC23BQ15437 767 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 ALG10Q5BKT4 473 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 C1QTNF12Q5T7M4 302 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 LINGO2Q7L985 606 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 HDDC2Q7Z4H3 204 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 OR4K5Q8NGD3 323 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 ZNF566Q969W8 418 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 SLC25A44Q96H78 314 aaPredicted RBP18.37■□□□□ 0.53
SEC13-217ENST00000482647 ALPK1Q96QP1 1244 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 TNFRSF13CQ96RJ3 184 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 CRLF2Q9HC73 371 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 GPR35Q9HC97 309 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 POMPQ9Y244 141 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 SIAH2O43255 324 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 HOXB6P17509 224 aaKnown RBP18.36■□□□□ 0.53
SEC13-217ENST00000482647 IFNGR2P38484 337 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 CSNK1A1P48729 337 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 FLOT2Q14254 428 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 NAV2Q8IVL1 2488 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 OR1K1Q8NGR3 316 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 OR13C2Q8NGS9 318 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 OR52N5Q8NH56 324 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 BOD1Q96IK1 185 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 FAM46AQ96IP4 442 aaKnown RBP18.36■□□□□ 0.53
SEC13-217ENST00000482647 MMADHCQ9H3L0 296 aaPredicted RBP18.36■□□□□ 0.53
SEC13-217ENST00000482647 SLC17A5Q9NRA2 495 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 STX18Q9P2W9 335 aaKnown RBP18.36■□□□□ 0.53
SEC13-217ENST00000482647 AURKCQ9UQB9 309 aa18.36■□□□□ 0.53
SEC13-217ENST00000482647 TRAV27A0A087WT01 109 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.35■□□□□ 0.53
SEC13-217ENST00000482647 NPIPB13A6NJU9 1138 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 NPIPB4C9JG80 1138 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 MCIDASD6RGH6 385 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 CDC42EP2O14613 210 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 RAP2AP10114 183 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 OMPP47874 163 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 HMGA2P52926 109 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 PRPS1P60891 318 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 MELKQ14680 651 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 TAF11Q15544 211 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 ACKR1Q16570 336 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 ZBED5Q49AG3 693 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 PHYHD1Q5SRE7 291 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 ANKRD16Q6P6B7 361 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 KLHL24Q6TFL4 600 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 WDFY1Q8IWB7 410 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 WDR31Q8NA23 367 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 PLPPR2Q96GM1 343 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 NDEL1Q9GZM8 345 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 LRMDAQ9H2I8 198 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 ESRP2Q9H6T0 727 aaKnown RBP18.35■□□□□ 0.53
SEC13-217ENST00000482647 GLTPQ9NZD2 209 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 SLC7A8Q9UHI5 535 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 AMDHD2Q9Y303 409 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 SLC25A15Q9Y619 301 aa18.35■□□□□ 0.53
SEC13-217ENST00000482647 DHRS12A0PJE2 317 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 CENPBD1B2RD01 187 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 TNFRSF11BO00300 401 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 OR10H3O60404 316 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 IGHG1P01857 330 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 ARF1P84077 181 aaKnown RBP18.34■□□□□ 0.53
SEC13-217ENST00000482647 FHL1Q13642 323 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 CEACAM16Q2WEN9 425 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 HIKESHIQ53FT3 197 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 CCDC121Q6ZUS5 278 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 SPATA24Q86W54 205 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 ADGRG5Q8IZF4 528 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 ASB10Q8WXI3 467 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 BCL2L2Q92843 193 aaPredicted RBP18.34■□□□□ 0.53
SEC13-217ENST00000482647 TMEM54Q969K7 222 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 CHID1Q9BWS9 393 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 ULBP2Q9BZM5 246 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 TXNIPQ9H3M7 391 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 OBP2BQ9NPH6 170 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 EDARQ9UNE0 448 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 ABCA4P78363 2273 aa18.34■□□□□ 0.53
SEC13-217ENST00000482647 POLQO75417 2590 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 A0A1W2PR80 420 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 PTP4A3O75365 173 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 WNT11O96014 354 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 HOXB1P14653 301 aaPredicted RBP18.33■□□□□ 0.52
SEC13-217ENST00000482647 RPL4P36578 427 aaKnown RBP18.33■□□□□ 0.52
SEC13-217ENST00000482647 LIMS1P48059 325 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 CLRN1P58418 232 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 CTXN1P60606 82 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 CBX1P83916 185 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 TBRG1Q3YBR2 411 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 ARMC4Q5T2S8 1044 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 KLHL17Q6TDP4 642 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 ZER1Q7Z7L7 766 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 LINC00471Q8N535 108 aa18.33■□□□□ 0.52
SEC13-217ENST00000482647 MAGEE2Q8TD90 523 aaPredicted RBP18.33■□□□□ 0.52
SEC13-217ENST00000482647 ZNF837Q96EG3 531 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms