RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 RPS5P46782 204 aaKnown RBP12.66□□□□□ -0.38
HDAC6-224ENST00000481929 MFSD13AQ14CX5 517 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 SYPL1Q16563 259 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 ATG16L1Q676U5 607 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 LRRC74BQ6ZQY2 392 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 SNX32Q86XE0 403 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 C20orf196Q8IYI0 205 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 MZB1Q8WU39 189 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 C11orf40Q8WZ69 217 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 NEURL3Q96EH8 262 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 GATA5Q9BWX5 397 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-224ENST00000481929 MTHFD2LQ9H903 347 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-224ENST00000481929 RLIMQ9NVW2 624 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 SEC14L4Q9UDX3 406 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 FAM181BA6NEQ2 426 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 AIM2O14862 343 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 CPSF4O95639 269 aaKnown RBP12.65□□□□□ -0.38
HDAC6-224ENST00000481929 SERPINA5P05154 406 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 LCKP06239 509 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 CHRNGP07510 517 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 NCF2P19878 526 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-224ENST00000481929 MAKP20794 623 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 ACAA2P42765 397 aaKnown RBP12.65□□□□□ -0.38
HDAC6-224ENST00000481929 CCT5P48643 541 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 AQP5P55064 265 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 CLDN8P56748 225 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 RBBP4Q09028 425 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 MOGQ16653 247 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 ASPHD2Q6ICH7 369 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 SYT10Q6XYQ8 523 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 ANKRD46Q86W74 232 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 C10orf107Q8IVU9 208 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 PEX5LQ8IYB4 626 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 AGR3Q8TD06 166 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 GTF3AQ92664 365 aaKnown RBP12.65□□□□□ -0.38
HDAC6-224ENST00000481929 C3orf30Q96M34 536 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 FOXB1Q99853 325 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 PTDSS2Q9BVG9 487 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 OR51B6Q9H340 312 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 INSIG2Q9Y5U4 225 aa12.65□□□□□ -0.38
HDAC6-224ENST00000481929 A0A1W2PPM1 405 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 CLPSL1A2RUU4 121 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 CDHR4A6H8M9 788 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 SLC22A31A6NKX4 558 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 M0R082 166 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 PIN1P1O15428 100 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 HOXA3O43365 443 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-224ENST00000481929 OR8G3PP0DMU2 310 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 DRD4P21917 467 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 ERVS71-1P61550 626 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 GLO1Q04760 184 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 LIN52Q52LA3 116 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 FAM209AQ5JX71 171 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 C9orf139Q6ZV77 190 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 RNF130Q86XS8 419 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 ZNF584Q8IVC4 421 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 ICA1LQ8NDH6 482 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 CPEB3Q8NE35 698 aaKnown RBP12.64□□□□□ -0.39
HDAC6-224ENST00000481929 SLC30A7Q8NEW0 376 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 OR8J2Q8NGG1 315 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 OR52E2Q8NGJ4 325 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 ZNF417Q8TAU3 575 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 LRR1Q96L50 414 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 ZNF587Q96SQ5 575 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-224ENST00000481929 SLC35A5Q9BS91 424 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 MECRQ9BV79 373 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 RSPO3Q9BXY4 272 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-224ENST00000481929 ULBP2Q9BZM5 246 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 CDH20Q9HBT6 801 aa12.64□□□□□ -0.39
HDAC6-224ENST00000481929 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDAC6-224ENST00000481929 POLR3KQ9Y2Y1 108 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-224ENST00000481929 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 PRSS51A0A1B0GVH4 220 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 TRAPPC2LH3BP13 241 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 TRIM13O60858 407 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 NGFP01138 241 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 IGHV4-38-2P0DP08 117 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 ECHS1P30084 290 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 CASQ1P31415 396 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 CRHR1P34998 444 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 ANXA11P50995 505 aaKnown RBP12.63□□□□□ -0.39
HDAC6-224ENST00000481929 ZNF81P51508 661 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 MAD2L1Q13257 205 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-224ENST00000481929 TAF9Q16594 264 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 ANXA8L1Q5VT79 327 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 ZNF836Q6ZNA1 936 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 JAZF1Q86VZ6 243 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 UEVLDQ8IX04 471 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 VPS37AQ8NEZ2 397 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 OR6N1Q8NGY5 312 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 PNPT1Q8TCS8 783 aaKnown RBP12.63□□□□□ -0.39
HDAC6-224ENST00000481929 TUBGCP3Q96CW5 907 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 KTI12Q96EK9 354 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-224ENST00000481929 EMC6Q9BV81 110 aa12.63□□□□□ -0.39
HDAC6-224ENST00000481929 LOC102725191A0A1B0GVB3 256 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 MDFIC2A0A1B0GVS7 189 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 OR2T1O43869 369 aa12.62□□□□□ -0.39
HDAC6-224ENST00000481929 FZD7O75084 574 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms